RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 PLCXD1Q9NUJ7 323 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 CLDND1Q9NY35 253 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 DLGAP2Q9P1A6 1054 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 ADAM30Q9UKF2 790 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 FAF1Q9UNN5 650 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 MRPS33Q9Y291 106 aaKnown RBP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 NEU2Q9Y3R4 380 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 CNTNAP2Q9UHC6 1331 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 A0A0A6YYH2 397 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 PRAMEF25A6NGN4 478 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 TUBAL3A6NHL2 446 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 A6NJ64 397 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 FAM90A7PA6NKC0 464 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 FAM90A22PA8MWA6 464 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 FAM90A12PA8MX19 464 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 FAM90A23PA8MXZ1 464 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 PRAMEF26H0Y7S4 382 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 LINC01387J3KSC0 135 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 IFNL4K9M1U5 179 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 TOR1AO14656 332 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 TERTO14746 1132 aaKnown RBP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 KLRC4O43908 158 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 HCN1O60741 890 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 PRAMEF4O60810 478 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 PRAMEF11O60813 436 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 STX11O75558 287 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 IFNA6P05013 189 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 SERPINA6P08185 405 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 RPS17P08708 135 aaKnown RBP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 LBPP18428 481 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 PSMB6P28072 239 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 PCK1P35558 622 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 WASP42768 502 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 CAMPP49913 170 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 CEBPGP53567 150 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 GNG11P61952 73 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 ENPP2Q13822 863 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 PDE7AQ13946 482 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 FLOT2Q14254 428 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 CNPY1Q3B7I2 92 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 C4orf17Q53FE4 359 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 KLHL22Q53GT1 634 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 C2CD6Q53TS8 623 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 YIF1BQ5BJH7 314 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 CLLU1OSQ5K130 101 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 RAET1LQ5VY80 246 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 SLC39A4Q6P5W5 647 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 TSSK4Q6SA08 328 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 GLB1LQ6UWU2 654 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 KCTD20Q7Z5Y7 419 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 SLC13A5Q86YT5 568 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 DEFB123Q8N688 67 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 KIAA0895Q8NCT3 520 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 SMG8Q8ND04 991 aaKnown RBP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 SLC17A8Q8NDX2 589 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 CPEB3Q8NE35 698 aaKnown RBP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 BEST2Q8NFU1 509 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 OR13C3Q8NGS6 347 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 OR52N1Q8NH53 320 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 SNIP1Q8TAD8 396 aaKnown RBP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 RFT1Q96AA3 541 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 TCTN2Q96GX1 697 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 PRR11Q96HE9 360 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 FOXN4Q96NZ1 517 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 TECTBQ96PL2 329 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 BBS4Q96RK4 519 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 CCT8L2Q96SF2 557 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 NPAS2Q99743 824 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 OLFM1Q99784 485 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 CBWD1Q9BRT8 395 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 FAM213AQ9BRX8 229 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 INPP5KQ9BT40 448 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 MSTO1Q9BUK6 570 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 ANKRD60Q9BZ19 345 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 DPH1Q9BZG8 443 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 HAPLN2Q9GZV7 340 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 SLC22A4Q9H015 551 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 OR2AG1Q9H205 316 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 PLK3Q9H4B4 646 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 BCO1Q9HAY6 547 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 GOLGA2P5Q9HBQ8 144 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 SAMSN1Q9NSI8 373 aaKnown RBP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 ARMC1Q9NVT9 282 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 PARPBPQ9NWS1 579 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 TMEM161AQ9NX61 479 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 CNOT2Q9NZN8 540 aaKnown RBP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 OR6C3Q9NZP0 311 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 CLEC1BQ9P126 229 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 HSFX1Q9UBD0 423 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 SEC14L3Q9UDX4 400 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 UBQLN2Q9UHD9 624 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 NOCTQ9UK39 431 aaKnown RBP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 POFUT2Q9Y2G5 429 aa4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 WBP11Q9Y2W2 641 aaKnown RBP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 PRG3Q9Y2Y8 225 aaPredicted RBP4.81□□□□□ -1.64
TRAPPC11-208ENST00000511955 A0A1B0GUH1 482 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 LINC01553A4QN01 128 aa4.8□□□□□ -1.64
TRAPPC11-208ENST00000511955 ARL5CA6NH57 179 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms