RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 LMO7DNF2Z398 122 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 MKRN2OSH3BPM6 223 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 IFNL4K9M1U5 179 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 RAD51BO15315 384 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 RAD1O60671 282 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 CCDC130P13994 396 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 CD58P19256 250 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 PSMA5P28066 241 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 AKT2P31751 481 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 ORC2Q13416 577 aaPredicted RBP5.92□□□□□ -1.46
USP53-206ENST00000510737 NAA25Q14CX7 972 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 KCTD8Q6ZWB6 473 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 TAOK1Q7L7X3 1001 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 ZNF720Q7Z2F6 126 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 ACOT1Q86TX2 421 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 PARGQ86W56 976 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 C12orf29Q8N999 325 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 Q8N9G6 341 aaPredicted RBP5.92□□□□□ -1.46
USP53-206ENST00000510737 FIBINQ8TAL6 211 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 SLC2A14Q8TDB8 520 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 C19orf60Q96EN9 201 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 STRA6Q9BX79 667 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 ST6GALNAC4Q9H4F1 302 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 PARVGQ9HBI0 331 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 RASSF1Q9NS23 344 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 CLIC5Q9NZA1 410 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 STOML2Q9UJZ1 356 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 PILRAQ9UKJ1 303 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 CARD8Q9Y2G2 431 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 SCN8AQ9UQD0 1980 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 CCDC168Q8NDH2 2452 aa5.92□□□□□ -1.46
USP53-206ENST00000510737 TDRD6O60522 2096 aaKnown RBP5.92□□□□□ -1.46
USP53-206ENST00000510737 RNF103O00237 685 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 PFKFB2O60825 505 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 TBL1XO60907 577 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 NADKO95544 446 aaPredicted RBP5.91□□□□□ -1.46
USP53-206ENST00000510737 LDHAP00338 332 aaKnown RBP5.91□□□□□ -1.46
USP53-206ENST00000510737 TUBBP07437 444 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 SRPRAP08240 638 aaKnown RBP5.91□□□□□ -1.46
USP53-206ENST00000510737 RALAP11233 206 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 KRT5P13647 590 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 PAX1P15863 534 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 USP8P40818 1118 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 LEPRP48357 1165 aaKnown RBP5.91□□□□□ -1.46
USP53-206ENST00000510737 STK19P49842 368 aaPredicted RBP5.91□□□□□ -1.46
USP53-206ENST00000510737 CLCNKAP51800 687 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 TUBB4BP68371 445 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 PIP5KL1Q5T9C9 394 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 SEL1L3Q68CR1 1132 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 HIST2H2BDQ6DRA6 164 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 NEK5Q6P3R8 708 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 RFWD3Q6PCD5 774 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 CLEC20AQ6ZU45 233 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 TADA2BQ86TJ2 420 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 HORMAD1Q86X24 394 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 DSELQ8IZU8 1212 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 APCDD1Q8J025 514 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 JAKMIP2Q96AA8 810 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 FBXL8Q96CD0 374 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 ANKRD36BP1Q96IX9 119 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 C17orf77Q96MU5 243 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 ZNF570Q96NI8 536 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 RANBP9Q96S59 729 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 CBWD1Q9BRT8 395 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 SDCBP2Q9H190 292 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 ZHX3Q9H4I2 956 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 GPN2Q9H9Y4 310 aaPredicted RBP5.91□□□□□ -1.46
USP53-206ENST00000510737 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.91□□□□□ -1.46
USP53-206ENST00000510737 PEMTQ9UBM1 199 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 SPASTQ9UBP0 616 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 NAALADL1Q9UQQ1 740 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 OR2W1Q9Y3N9 320 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 ATP8B3O60423 1300 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 ITIH6Q6UXX5 1313 aa5.91□□□□□ -1.46
USP53-206ENST00000510737 ZNF469Q96JG9 3925 aaPredicted RBP5.91□□□□□ -1.46
USP53-206ENST00000510737 SHANK1Q9Y566 2161 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 HEATR9A2RTY3 570 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 AKR1B15C9JRZ8 316 aaPredicted RBP5.9□□□□□ -1.46
USP53-206ENST00000510737 B4GAT1O43505 415 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 TNNC2P02585 160 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 MMP2P08253 660 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 TCN2P20062 427 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 F8A1P23610 371 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 NUMBP49757 651 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 HNRNPH2P55795 449 aaKnown RBP5.9□□□□□ -1.46
USP53-206ENST00000510737 MYL6P60660 151 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 ISL1P61371 349 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 TNNC1P63316 161 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 PDE1CQ14123 709 aaPredicted RBP5.9□□□□□ -1.46
USP53-206ENST00000510737 ELAVL3Q14576 367 aaKnown RBP5.9□□□□□ -1.46
USP53-206ENST00000510737 C2orf68Q2NKX9 166 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 ZNF876PQ49A33 203 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 MPP7Q5T2T1 576 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 SERTAD4-AS1Q5TG53 156 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 CCDC186Q7Z3E2 898 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 PTAR1Q7Z6K3 402 aaPredicted RBP5.9□□□□□ -1.46
USP53-206ENST00000510737 TMEM135Q86UB9 458 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 GPAT4Q86UL3 456 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 GPBP1Q86WP2 473 aa5.9□□□□□ -1.46
USP53-206ENST00000510737 CRYBG2Q8N1P7 616 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms