RNA–Protein interactions for RNA: ENST00000510199.5

RACK1-223, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 1,100 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-223	ENST00000510199	PISD	Q9UG56	409 aa		11.34	□□□□□ -0.59
RACK1-223	ENST00000510199	SATB2	Q9UPW6	733 aa		11.34	□□□□□ -0.59
RACK1-223	ENST00000510199	DLGAP4	Q9Y2H0	992 aa		11.34	□□□□□ -0.59
RACK1-223	ENST00000510199	WBP11	Q9Y2W2	641 aa	Known RBP	11.34	□□□□□ -0.59
RACK1-223	ENST00000510199	NAALAD2	Q9Y3Q0	740 aa		11.34	□□□□□ -0.59
RACK1-223	ENST00000510199	PCDHGA3	Q9Y5H0	932 aa		11.34	□□□□□ -0.59
RACK1-223	ENST00000510199		A0A0A6YYC8	382 aa	Predicted RBP	11.33	□□□□□ -0.6
RACK1-223	ENST00000510199		A0A1B0GX78	115 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199		A0A1W2PNU3	283 aa	Predicted RBP	11.33	□□□□□ -0.6
RACK1-223	ENST00000510199		I3L1I5	382 aa	Predicted RBP	11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	SGK494	L7N484	410 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	CPNE3	O75131	537 aa	Known RBP	11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	TIAF1	O95411	115 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	GBA	P04062	536 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	G6PD	P11413	515 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	NCF2	P19878	526 aa	Predicted RBP	11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	ALAS2	P22557	587 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	CERS1	P27544	350 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	ASMT	P46597	345 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	MRPL19	P49406	292 aa	Known RBP	11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	ATP4B	P51164	291 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	MAPK12	P53778	367 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	DIO3	P55073	304 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	SLAMF1	Q13291	335 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	PUM1	Q14671	1186 aa	Known RBP eCLIP	11.33	□□□□□ -0.6	1e-28	■□□□□ 8.2
RACK1-223	ENST00000510199	TMEM164	Q5U3C3	297 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	CACNA2D3	Q8IZS8	1091 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	PROKR1	Q8TCW9	393 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	C16orf78	Q8WTQ4	265 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	CLIP3	Q96DZ5	547 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	MMAB	Q96EY8	250 aa	Predicted RBP	11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	LRFN5	Q96NI6	719 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	CATSPER2	Q96P56	530 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	ZNF385D	Q9H6B1	395 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	LYRM4	Q9HD34	91 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	DHCR7	Q9UBM7	475 aa	Known RBP	11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	NDOR1	Q9UHB4	597 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	G3BP2	Q9UN86	482 aa	Known RBP	11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	ASB4	Q9Y574	426 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	PCDHGA8	Q9Y5G5	932 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	GPR45	Q9Y5Y3	372 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	B3GALT1	Q9Y5Z6	326 aa		11.33	□□□□□ -0.6
RACK1-223	ENST00000510199	PIEZO1	Q92508	2521 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	FAM149A	A5PLN7	773 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	TMPRSS11D	O60235	418 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	CCDC22	O60826	627 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	GUCY1B2	O75343	617 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	RDH16	O75452	317 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	DCTN3	O75935	186 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	NTRK1	P04629	796 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	FAM58BP	P0C7Q3	252 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	TACR1	P25103	407 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	LIM2	P55344	173 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	STX1B	P61266	288 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	RUNX2	Q13950	521 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	SQLE	Q14534	574 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	RPS6KA2	Q15349	733 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	PDCD4	Q53EL6	469 aa	Known RBP	11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	FOXR1	Q6PIV2	292 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	IKBIP	Q70UQ0	350 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	CLNK	Q7Z7G1	428 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	CA13	Q8N1Q1	262 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	MIER2	Q8N344	545 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	DTWD1	Q8N5C7	304 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	CPSF7	Q8N684	471 aa	Known RBP	11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	SLC38A9	Q8NBW4	561 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	PMEPA1	Q969W9	287 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	TM4SF18	Q96CE8	201 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	MARK4	Q96L34	752 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	TSSK3	Q96PN8	268 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	GBP5	Q96PP8	586 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	MAPKAP1	Q9BPZ7	522 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	POLR1B	Q9H9Y6	1135 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	ZNF304	Q9HCX3	659 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	MYNN	Q9NPC7	610 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	SAR1A	Q9NR31	198 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	SDR39U1	Q9NRG7	319 aa	Predicted RBP	11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	MS4A12	Q9NXJ0	267 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	KCMF1	Q9P0J7	381 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	BAIAP2L1	Q9UHR4	511 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	PHF11	Q9UIL8	331 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	DAPP1	Q9UN19	280 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	MAPRE3	Q9UPY8	281 aa		11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	COPG1	Q9Y678	874 aa	Known RBP	11.32	□□□□□ -0.6
RACK1-223	ENST00000510199	PMS2P1	A4D2B8	440 aa		11.31	□□□□□ -0.6
RACK1-223	ENST00000510199	ZNF860	A6NHJ4	632 aa		11.31	□□□□□ -0.6
RACK1-223	ENST00000510199	C9orf172	C9J069	976 aa		11.31	□□□□□ -0.6
RACK1-223	ENST00000510199	FCHO1	O14526	889 aa		11.31	□□□□□ -0.6
RACK1-223	ENST00000510199	ANKRD28	O15084	1053 aa		11.31	□□□□□ -0.6
RACK1-223	ENST00000510199	PROM1	O43490	865 aa		11.31	□□□□□ -0.6
RACK1-223	ENST00000510199	CHST10	O43529	356 aa		11.31	□□□□□ -0.6
RACK1-223	ENST00000510199	PRMT3	O60678	531 aa		11.31	□□□□□ -0.6
RACK1-223	ENST00000510199	KIAA0754	O94854	1291 aa		11.31	□□□□□ -0.6
RACK1-223	ENST00000510199	ONECUT2	O95948	504 aa		11.31	□□□□□ -0.6
RACK1-223	ENST00000510199	PIM1	P11309	404 aa	Predicted RBP	11.31	□□□□□ -0.6
RACK1-223	ENST00000510199	ZNF28	P17035	718 aa		11.31	□□□□□ -0.6
RACK1-223	ENST00000510199	ADSL	P30566	484 aa	Predicted RBP	11.31	□□□□□ -0.6
RACK1-223	ENST00000510199	RORA	P35398	523 aa		11.31	□□□□□ -0.6
RACK1-223	ENST00000510199	HNRNPH2	P55795	449 aa	Known RBP	11.31	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms