RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 PCDHA13Q9Y5I0 950 aa9.87□□□□□ -0.83
SNF8-207ENST00000509995 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.86□□□□□ -0.83
SNF8-207ENST00000509995 H7BY64 318 aa9.86□□□□□ -0.83
SNF8-207ENST00000509995 CHST10O43529 356 aa9.86□□□□□ -0.83
SNF8-207ENST00000509995 LMX1BO60663 402 aa9.86□□□□□ -0.83
SNF8-207ENST00000509995 IGHV4-39P01824 125 aa9.86□□□□□ -0.83
SNF8-207ENST00000509995 HK2P52789 917 aa9.86□□□□□ -0.83
SNF8-207ENST00000509995 KCNJ2P63252 427 aa9.86□□□□□ -0.83
SNF8-207ENST00000509995 RCAN2Q14206 197 aa9.86□□□□□ -0.83
SNF8-207ENST00000509995 ARHGAP19Q14CB8 494 aa9.86□□□□□ -0.83
SNF8-207ENST00000509995 HECTD2Q5U5R9 776 aa9.86□□□□□ -0.83
SNF8-207ENST00000509995 ADGRD1Q6QNK2 874 aa9.86□□□□□ -0.83
SNF8-207ENST00000509995 ZNF550Q7Z398 422 aa9.86□□□□□ -0.83
SNF8-207ENST00000509995 MILR1Q7Z6M3 343 aa9.86□□□□□ -0.83
SNF8-207ENST00000509995 AFAP1L2Q8N4X5 818 aa9.86□□□□□ -0.83
SNF8-207ENST00000509995 RFLNBQ8N5W9 214 aa9.86□□□□□ -0.83
SNF8-207ENST00000509995 C3orf56Q8N813 242 aa9.86□□□□□ -0.83
SNF8-207ENST00000509995 SREK1Q8WXA9 508 aaKnown RBP9.86□□□□□ -0.83
SNF8-207ENST00000509995 ANKRD9Q96BM1 317 aaPredicted RBP9.86□□□□□ -0.83
SNF8-207ENST00000509995 PDLIM2Q96JY6 352 aa9.86□□□□□ -0.83
SNF8-207ENST00000509995 PRAP1Q96NZ9 151 aa9.86□□□□□ -0.83
SNF8-207ENST00000509995 TBL1YQ9BQ87 522 aa9.86□□□□□ -0.83
SNF8-207ENST00000509995 C12orf65Q9H3J6 166 aaKnown RBP9.86□□□□□ -0.83
SNF8-207ENST00000509995 ARNT2Q9HBZ2 717 aa9.86□□□□□ -0.83
SNF8-207ENST00000509995 ZNHIT6Q9NWK9 470 aaKnown RBP9.86□□□□□ -0.83
SNF8-207ENST00000509995 AAR2Q9Y312 384 aaKnown RBP9.86□□□□□ -0.83
SNF8-207ENST00000509995 ALPK2Q86TB3 2170 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 VWFP04275 2813 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 IGHV4-30-2A0A087WSY4 118 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 CCDC162PA2VCL2 907 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 MYO1CO00159 1063 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 SMAPO00193 183 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 MSTNO14793 375 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 KPNA5O15131 536 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 GALR3O60755 368 aaPredicted RBP9.85□□□□□ -0.83
SNF8-207ENST00000509995 ZNF354AO60765 605 aaPredicted RBP9.85□□□□□ -0.83
SNF8-207ENST00000509995 RCBTB2O95199 551 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 PLAUP00749 431 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 THBS1P07996 1170 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 SLC35G6P0C7Q6 338 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 ITGA2P17301 1181 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 GDF1P27539 372 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 PSMB4P28070 264 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 UGT2B10P36537 528 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 CDKN1AP38936 164 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 CD79BP40259 229 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 SLCO1A2P46721 670 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 COMPP49747 757 aaPredicted RBP9.85□□□□□ -0.83
SNF8-207ENST00000509995 PNLIPRP1P54315 467 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 EIF3BP55884 814 aaKnown RBP9.85□□□□□ -0.83
SNF8-207ENST00000509995 SKP1P63208 163 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 KLHL30Q0D2K2 578 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 DEFB134Q4QY38 66 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 FAM120AOSQ5T036 256 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 DCST1Q5T197 706 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 PRAMEF20Q5VT98 475 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 VASNQ6EMK4 673 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 ITPRIPL1Q6GPH6 555 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 OPN5Q6U736 354 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 PLXDC2Q6UX71 529 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 SH2D5Q6ZV89 423 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 ASPGQ86U10 573 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 GCNT2Q8N0V5 402 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 PPFIBP2Q8ND30 876 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 ZNF740Q8NDX6 193 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 PPHLN1Q8NEY8 458 aaKnown RBP9.85□□□□□ -0.83
SNF8-207ENST00000509995 SLC44A1Q8WWI5 657 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 INTS12Q96CB8 462 aaKnown RBP9.85□□□□□ -0.83
SNF8-207ENST00000509995 THAP11Q96EK4 314 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 WDYHV1Q96HA8 205 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 QKIQ96PU8 341 aaKnown RBP eCLIP9.85□□□□□ -0.83
SNF8-207ENST00000509995 FAM111AQ96PZ2 611 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 TTC1Q99614 292 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 TM9SF2Q99805 663 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 ACBD3Q9H3P7 528 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 AIPL1Q9NZN9 384 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 ZFATQ9P243 1243 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 PRR14LQ5THK1 2151 aa9.85□□□□□ -0.83
SNF8-207ENST00000509995 LRRC14BA6NHZ5 514 aa9.84□□□□□ -0.83
SNF8-207ENST00000509995 E7ENX8 843 aa9.84□□□□□ -0.83
SNF8-207ENST00000509995 KRT1P04264 644 aa9.84□□□□□ -0.83
SNF8-207ENST00000509995 HNF1AP20823 631 aa9.84□□□□□ -0.83
SNF8-207ENST00000509995 PSMA3P25788 255 aa9.84□□□□□ -0.83
SNF8-207ENST00000509995 COILP38432 576 aaPredicted RBP9.84□□□□□ -0.83
SNF8-207ENST00000509995 LOXL1Q08397 574 aaPredicted RBP9.84□□□□□ -0.83
SNF8-207ENST00000509995 POU6F1Q14863 301 aa9.84□□□□□ -0.83
SNF8-207ENST00000509995 ANKRD20A4Q4UJ75 823 aa9.84□□□□□ -0.83
SNF8-207ENST00000509995 MIDNQ504T8 468 aa9.84□□□□□ -0.83
SNF8-207ENST00000509995 BEX5Q5H9J7 111 aa9.84□□□□□ -0.83
SNF8-207ENST00000509995 NHSL2Q5HYW2 709 aa9.84□□□□□ -0.83
SNF8-207ENST00000509995 CT47A1Q5JQC4 288 aaPredicted RBP9.84□□□□□ -0.83
SNF8-207ENST00000509995 ANKRD20A2Q5SQ80 823 aa9.84□□□□□ -0.83
SNF8-207ENST00000509995 ANKRD20A1Q5TYW2 823 aa9.84□□□□□ -0.83
SNF8-207ENST00000509995 ANKRD20A3Q5VUR7 823 aa9.84□□□□□ -0.83
SNF8-207ENST00000509995 CYB5R2Q6BCY4 276 aa9.84□□□□□ -0.83
SNF8-207ENST00000509995 HSDL2Q6YN16 418 aa9.84□□□□□ -0.83
SNF8-207ENST00000509995 C22orf34Q6ZV56 151 aa9.84□□□□□ -0.83
SNF8-207ENST00000509995 LDB1Q86U70 411 aaPredicted RBP9.84□□□□□ -0.83
SNF8-207ENST00000509995 ZPLD1Q8TCW7 415 aa9.84□□□□□ -0.83
SNF8-207ENST00000509995 SLC13A3Q8WWT9 602 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms