RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 KHDRBS2Q5VWX1 349 aaKnown RBP17.07■□□□□ 0.32
CLDND1-220ENST00000508902 B3GNTL1Q67FW5 361 aaPredicted RBP17.07■□□□□ 0.32
CLDND1-220ENST00000508902 SLC6A19Q695T7 634 aa17.07■□□□□ 0.32
CLDND1-220ENST00000508902 QSOX2Q6ZRP7 698 aa17.07■□□□□ 0.32
CLDND1-220ENST00000508902 MYLK4Q86YV6 388 aaPredicted RBP17.07■□□□□ 0.32
CLDND1-220ENST00000508902 FAM47BQ8NA70 645 aa17.07■□□□□ 0.32
CLDND1-220ENST00000508902 OR4F6Q8NGB9 312 aa17.07■□□□□ 0.32
CLDND1-220ENST00000508902 BRIX1Q8TDN6 353 aaKnown RBP17.07■□□□□ 0.32
CLDND1-220ENST00000508902 NPAS2Q99743 824 aa17.07■□□□□ 0.32
CLDND1-220ENST00000508902 MAPKAP1Q9BPZ7 522 aa17.07■□□□□ 0.32
CLDND1-220ENST00000508902 NTMT1Q9BV86 223 aa17.07■□□□□ 0.32
CLDND1-220ENST00000508902 LHPPQ9H008 270 aa17.07■□□□□ 0.32
CLDND1-220ENST00000508902 RAB21Q9UL25 225 aa17.07■□□□□ 0.32
CLDND1-220ENST00000508902 TMCO1Q9UM00 188 aa17.07■□□□□ 0.32
CLDND1-220ENST00000508902 PCDHGB7Q9Y5F8 929 aa17.07■□□□□ 0.32
CLDND1-220ENST00000508902 RP1L1Q8IWN7 2480 aaPredicted RBP17.06■□□□□ 0.32
CLDND1-220ENST00000508902 SERPINA7P05543 415 aa17.06■□□□□ 0.32
CLDND1-220ENST00000508902 IL10P22301 178 aa17.06■□□□□ 0.32
CLDND1-220ENST00000508902 ATP5A1P25705 553 aaKnown RBP17.06■□□□□ 0.32
CLDND1-220ENST00000508902 RAB38P57729 211 aa17.06■□□□□ 0.32
CLDND1-220ENST00000508902 TLE1Q04724 770 aa17.06■□□□□ 0.32
CLDND1-220ENST00000508902 SLC18A2Q05940 514 aa17.06■□□□□ 0.32
CLDND1-220ENST00000508902 HIST2H2ACQ16777 129 aaPredicted RBP17.06■□□□□ 0.32
CLDND1-220ENST00000508902 HIST2H2AA3Q6FI13 130 aa17.06■□□□□ 0.32
CLDND1-220ENST00000508902 TRIM40Q6P9F5 258 aa17.06■□□□□ 0.32
CLDND1-220ENST00000508902 IGFL3Q6UXB1 125 aa17.06■□□□□ 0.32
CLDND1-220ENST00000508902 C4orf33Q8N1A6 199 aa17.06■□□□□ 0.32
CLDND1-220ENST00000508902 SERINC2Q96SA4 455 aa17.06■□□□□ 0.32
CLDND1-220ENST00000508902 NPLQ9BXD5 320 aaPredicted RBP17.06■□□□□ 0.32
CLDND1-220ENST00000508902 CLK4Q9HAZ1 481 aaKnown RBP17.06■□□□□ 0.32
CLDND1-220ENST00000508902 FARSBQ9NSD9 589 aaKnown RBP17.06■□□□□ 0.32
CLDND1-220ENST00000508902 RIC8BQ9NVN3 520 aa17.06■□□□□ 0.32
CLDND1-220ENST00000508902 ANAPC2Q9UJX6 822 aa17.06■□□□□ 0.32
CLDND1-220ENST00000508902 DAPP1Q9UN19 280 aa17.06■□□□□ 0.32
CLDND1-220ENST00000508902 TCRBV16S1A1N1A0A5B0 115 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 MAN1A2O60476 641 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 PLIN3O60664 434 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 CDH16O75309 829 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 EEDO75530 441 aaKnown RBP17.05■□□□□ 0.32
CLDND1-220ENST00000508902 CLDN9O95484 217 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 GSTA1P08263 222 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 ATP5F1P24539 256 aaPredicted RBP17.05■□□□□ 0.32
CLDND1-220ENST00000508902 PIK3CBP42338 1070 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 CCNG1P51959 295 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 MTTPP55157 894 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 MLLT10P55197 1068 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 HERVK_113P63132 956 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 NSDHLQ15738 373 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 GGTA1PQ4G0N0 100 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 NIPAL1Q6NVV3 410 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 JMJD6Q6NYC1 403 aaPredicted RBP17.05■□□□□ 0.32
CLDND1-220ENST00000508902 EMBQ6PCB8 327 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 PAPD4Q6PIY7 484 aaKnown RBP17.05■□□□□ 0.32
CLDND1-220ENST00000508902 LCA5Q86VQ0 697 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 SIRT6Q8N6T7 355 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 ACOT4Q8N9L9 421 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 TRPC4APQ8TEL6 797 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 UBE2E3Q969T4 207 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 KCNC2Q96PR1 638 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 CCDC77Q9BR77 488 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 TUBB6Q9BUF5 446 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 ERVK-6Q9BXR3 956 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 GSTO2Q9H4Y5 243 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 C5AR2Q9P296 337 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 LGALS13Q9UHV8 139 aa17.05■□□□□ 0.32
CLDND1-220ENST00000508902 HEMK1Q9Y5R4 338 aaPredicted RBP17.05■□□□□ 0.32
CLDND1-220ENST00000508902 USP9XQ93008 2570 aaPredicted RBP17.05■□□□□ 0.32
CLDND1-220ENST00000508902 MYOCOSA0A1B0GUC4 107 aa17.04■□□□□ 0.32
CLDND1-220ENST00000508902 PCDH17O14917 1159 aa17.04■□□□□ 0.32
CLDND1-220ENST00000508902 B3GALT2O43825 422 aa17.04■□□□□ 0.32
CLDND1-220ENST00000508902 TMPRSS11DO60235 418 aa17.04■□□□□ 0.32
CLDND1-220ENST00000508902 PRKRAO75569 313 aaKnown RBP17.04■□□□□ 0.32
CLDND1-220ENST00000508902 CREB1P16220 341 aa17.04■□□□□ 0.32
CLDND1-220ENST00000508902 HIST1H1TP22492 207 aaPredicted RBP17.04■□□□□ 0.32
CLDND1-220ENST00000508902 BSGP35613 385 aa17.04■□□□□ 0.32
CLDND1-220ENST00000508902 ST13P50502 369 aaKnown RBP17.04■□□□□ 0.32
CLDND1-220ENST00000508902 PRKAA2P54646 552 aa17.04■□□□□ 0.32
CLDND1-220ENST00000508902 HNRNPH2P55795 449 aaKnown RBP17.04■□□□□ 0.32
CLDND1-220ENST00000508902 PLEKHN1Q494U1 663 aaPredicted RBP17.04■□□□□ 0.32
CLDND1-220ENST00000508902 TMEM35AQ53FP2 167 aa17.04■□□□□ 0.32
CLDND1-220ENST00000508902 PLAG1Q6DJT9 500 aa17.04■□□□□ 0.32
CLDND1-220ENST00000508902 ATG14Q6ZNE5 492 aa17.04■□□□□ 0.32
CLDND1-220ENST00000508902 CUZD1Q86UP6 607 aa17.04■□□□□ 0.32
CLDND1-220ENST00000508902 TRABD2AQ86V40 505 aa17.04■□□□□ 0.32
CLDND1-220ENST00000508902 KBTBD2Q8IY47 623 aa17.04■□□□□ 0.32
CLDND1-220ENST00000508902 KIF2BQ8N4N8 673 aa17.04■□□□□ 0.32
CLDND1-220ENST00000508902 MREGQ8N565 214 aa17.04■□□□□ 0.32
CLDND1-220ENST00000508902 TEX19Q8NA77 164 aa17.04■□□□□ 0.32
CLDND1-220ENST00000508902 NFAM1Q8NET5 270 aaPredicted RBP17.04■□□□□ 0.32
CLDND1-220ENST00000508902 UCN3Q969E3 161 aa17.04■□□□□ 0.32
CLDND1-220ENST00000508902 MTFMTQ96DP5 389 aaKnown RBP17.04■□□□□ 0.32
CLDND1-220ENST00000508902 L3HYPDHQ96EM0 354 aa17.04■□□□□ 0.32
CLDND1-220ENST00000508902 CMTM7Q96FZ5 175 aa17.04■□□□□ 0.32
CLDND1-220ENST00000508902 FAR2Q96K12 515 aa17.04■□□□□ 0.32
CLDND1-220ENST00000508902 PTCHD1Q96NR3 888 aa17.04■□□□□ 0.32
CLDND1-220ENST00000508902 PPCSQ9HAB8 311 aa17.04■□□□□ 0.32
CLDND1-220ENST00000508902 TNFRSF12AQ9NP84 129 aa17.04■□□□□ 0.32
CLDND1-220ENST00000508902 PTGFRNQ9P2B2 879 aa17.04■□□□□ 0.32
CLDND1-220ENST00000508902 PCDHGA11Q9Y5H2 935 aa17.04■□□□□ 0.32
CLDND1-220ENST00000508902 A0A0A6YYD5 115 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms