RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 PMPCBO75439 489 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 GMNNO75496 209 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 UPK3AO75631 287 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 DFFBO76075 338 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 SNAI1O95863 264 aaPredicted RBP4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 TOP3BO95985 862 aaKnown RBP4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 NUDT17P0C025 328 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 CPA3P15088 417 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 CREB1P16220 341 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 DPP4P27487 766 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 DUSP1P28562 367 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 ETV5P41161 510 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 NAMPTP43490 491 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 LHX1P48742 406 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 PPT1P50897 306 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 ATP12AP54707 1039 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 DAOAP59103 153 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 SEC61GP60059 68 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 KRTAP10-7P60409 375 aaPredicted RBP4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 SSTP61278 116 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 CDK3Q00526 305 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 DR1Q01658 176 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 BDH1Q02338 343 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 CFHR1Q03591 330 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 KDSRQ06136 332 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 MERTKQ12866 999 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 TRAP1Q12931 704 aaKnown RBP4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 DMP1Q13316 513 aaPredicted RBP4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 ELAVL3Q14576 367 aaKnown RBP4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 HLXQ14774 488 aaPredicted RBP4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 TRIP10Q15642 601 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 PNLIPRP3Q17RR3 467 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 TCTN1Q2MV58 587 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 C2orf68Q2NKX9 166 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 ZC2HC1CQ53FD0 456 aaPredicted RBP4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 LACTB2Q53H82 288 aaPredicted RBP4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 ARL13AQ5H913 290 aaPredicted RBP4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 AGAP6Q5VW22 663 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 WSCD1Q658N2 575 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 PTRHD1Q6GMV3 140 aaKnown RBP4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 PRR27Q6MZM9 219 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 TTC27Q6P3X3 843 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 BLOC1S2Q6QNY1 142 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 KCTD8Q6ZWB6 473 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 DPPA4Q7L190 304 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 EIF3MQ7L2H7 374 aaKnown RBP4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 NDUFAF7Q7L592 441 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 YTHDF3Q7Z739 585 aaKnown RBP4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 VTCN1Q7Z7D3 282 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 LHFPL4Q7Z7J7 247 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 KIAA1328Q86T90 577 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 LINC00523Q86TU6 105 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 PAQR7Q86WK9 346 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 LRRC6Q86X45 466 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 MEX3DQ86XN8 651 aaKnown RBP4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 VRK2Q86Y07 508 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 GPR65Q8IYL9 337 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 ZNF611Q8N823 705 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 SIDT2Q8NBJ9 832 aaKnown RBP4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 TRMT10AQ8TBZ6 339 aaKnown RBP4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 GRHL3Q8TE85 626 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 SAP25Q8TEE9 199 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 TNFRSF14Q92956 283 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 STAMBPL1Q96FJ0 436 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 CASD1Q96PB1 797 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 SLITRK1Q96PX8 696 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 SEPHS2Q99611 448 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 RBM4BQ9BQ04 359 aaKnown RBP4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 C17orf62Q9BQA9 187 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 SH2D3AQ9BRG2 576 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 RBM4Q9BWF3 364 aaKnown RBP4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 SPZ1Q9BXG8 430 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 SLC39A8Q9C0K1 460 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 MFFQ9GZY8 342 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 BICC1Q9H694 974 aaKnown RBP4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 LRRC4Q9HBW1 653 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 MED4Q9NPJ6 270 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 DDX28Q9NUL7 540 aaKnown RBP4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 EURLQ9NYK6 297 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 RHCGQ9UBD6 479 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 ERRFI1Q9UJM3 462 aaPredicted RBP4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 FBXO4Q9UKT5 387 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 STAP1Q9ULZ2 295 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 TNNQ9UQP3 1299 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 KLF2Q9Y5W3 355 aaPredicted RBP4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 CUX2O14529 1486 aa4.03□□□□□ -1.76
SMARCA5-202ENST00000508573 A0A1W2PPK0 400 aa4.02□□□□□ -1.77
SMARCA5-202ENST00000508573 METTL21EPA6NDL7 271 aa4.02□□□□□ -1.77
SMARCA5-202ENST00000508573 FAM157AC9JC47 383 aa4.02□□□□□ -1.77
SMARCA5-202ENST00000508573 EIF3HO15372 352 aaKnown RBP eCLIP4.02□□□□□ -1.77
SMARCA5-202ENST00000508573 XRCC3O43542 346 aa4.02□□□□□ -1.77
SMARCA5-202ENST00000508573 LCMT2O60294 686 aaKnown RBP4.02□□□□□ -1.77
SMARCA5-202ENST00000508573 NME2P1O60361 137 aa4.02□□□□□ -1.77
SMARCA5-202ENST00000508573 CABYRO75952 493 aa4.02□□□□□ -1.77
SMARCA5-202ENST00000508573 NEBLO76041 1014 aa4.02□□□□□ -1.77
SMARCA5-202ENST00000508573 CNTN5O94779 1100 aa4.02□□□□□ -1.77
SMARCA5-202ENST00000508573 LUC7L3O95232 432 aaKnown RBP4.02□□□□□ -1.77
SMARCA5-202ENST00000508573 GAS8O95995 478 aa4.02□□□□□ -1.77
SMARCA5-202ENST00000508573 GOT2P00505 430 aaKnown RBP4.02□□□□□ -1.77
SMARCA5-202ENST00000508573 CHRNGP07510 517 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms