RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 RPL22P35268 128 aaKnown RBP8.71□□□□□ -1.02
NEDD9-211ENST00000508546 MAGEA5P43359 124 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 CDK16Q00536 496 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 RGS1Q08116 209 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 SNTB1Q13884 538 aaKnown RBP8.71□□□□□ -1.02
NEDD9-211ENST00000508546 KEAP1Q14145 624 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 BBS9Q3SYG4 887 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 WLSQ5T9L3 541 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 NEPROQ6NW34 567 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 AGTRAPQ6RW13 159 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 CES3Q6UWW8 571 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 C4orf22Q6V702 233 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 SYCE1Q8N0S2 351 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 TBC1D19Q8N5T2 526 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 TMEM251Q8N6I4 163 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 CD200R1Q8TD46 325 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 UTP15Q8TED0 518 aaKnown RBP8.71□□□□□ -1.02
NEDD9-211ENST00000508546 ASB15Q8WXK1 588 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 SARAFQ96BY9 339 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 LRRC46Q96FV0 321 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 HES6Q96HZ4 224 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 SH3GL2Q99962 352 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 FAM173AQ9BQD7 235 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 CCDC77Q9BR77 488 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 HAUS8Q9BT25 410 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 CCDC68Q9H2F9 335 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 IL1RL2Q9HB29 575 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 NEUROD4Q9HD90 331 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 MYOTQ9UBF9 498 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 FOXD3Q9UJU5 478 aaPredicted RBP8.71□□□□□ -1.02
NEDD9-211ENST00000508546 PDE10AQ9Y233 779 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 PCDHGB3Q9Y5G1 929 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 KIAA1549Q9HCM3 1950 aa8.71□□□□□ -1.02
NEDD9-211ENST00000508546 CHD3Q12873 2000 aaKnown RBP8.71□□□□□ -1.02
NEDD9-211ENST00000508546 A0A0G2JMM0 328 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 A0A1W2PPB8 328 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 A0A1W2PRS3 328 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 URADA6NGE7 173 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 HSPB2A8KAH6 182 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 KIR3DP1A8MWS1 328 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 SLC16A5O15375 505 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 PRKNO60260 465 aaPredicted RBP8.7□□□□□ -1.02
NEDD9-211ENST00000508546 HCN1O60741 890 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 OR2J2O76002 312 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 OR6B1O95007 311 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 IPO7O95373 1038 aaKnown RBP8.7□□□□□ -1.02
NEDD9-211ENST00000508546 C8GP07360 202 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 ZSCAN5DPP0CG00 497 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 SMIM10L1P0DMW3 83 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 PAMP19021 973 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 UQCRC1P31930 480 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 AHRP35869 848 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 MAN2A2P49641 1150 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 ASCL1P50553 236 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 CCR8P51685 355 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 FOXO1Q12778 655 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 NAE1Q13564 534 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 SLC10A1Q14973 349 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 HSPB2Q16082 182 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 XKR6Q5GH73 641 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 SHEQ5VZ18 495 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 ZNF470Q6ECI4 717 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 LRRC8EQ6NSJ5 796 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 ZNF549Q6P9A3 640 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 IL20RBQ6UXL0 311 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 PIWIL4Q7Z3Z4 852 aaKnown RBP8.7□□□□□ -1.02
NEDD9-211ENST00000508546 TMEM139Q8IV31 216 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 SCUBE1Q8IWY4 988 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 CPNE9Q8IYJ1 553 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 GOLM1Q8NBJ4 401 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 RELL2Q8NC24 303 aaPredicted RBP8.7□□□□□ -1.02
NEDD9-211ENST00000508546 SLCO2A1Q92959 643 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 RNASE6Q93091 150 aaKnown RBP8.7□□□□□ -1.02
NEDD9-211ENST00000508546 NCLNQ969V3 563 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 SMIM10Q96HG1 83 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 COX4I2Q96KJ9 171 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 SGCZQ96LD1 299 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 RASL10BQ96S79 203 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 GPR21Q99679 349 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 BAG1Q99933 345 aaPredicted RBP8.7□□□□□ -1.02
NEDD9-211ENST00000508546 AARSD1Q9BTE6 412 aaKnown RBP8.7□□□□□ -1.02
NEDD9-211ENST00000508546 TSGA10Q9BZW7 698 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 ATG10Q9H0Y0 220 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 ZNF395Q9H8N7 513 aaPredicted RBP8.7□□□□□ -1.02
NEDD9-211ENST00000508546 PLEKHF2Q9H8W4 249 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 PARVBQ9HBI1 364 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 RRAGDQ9NQL2 400 aaPredicted RBP8.7□□□□□ -1.02
NEDD9-211ENST00000508546 SAMD15Q9P1V8 674 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 ZFP69BQ9UJL9 534 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 ACAD8Q9UKU7 415 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 REXO2Q9Y3B8 237 aaKnown RBP8.7□□□□□ -1.02
NEDD9-211ENST00000508546 COMMD10Q9Y6G5 202 aa8.7□□□□□ -1.02
NEDD9-211ENST00000508546 CTAGE9A4FU28 777 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 SYNDIG1LA6NDD5 238 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 DVL2O14641 736 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 AVILO75366 819 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 FTCDO95954 541 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 SERPIND1P05546 499 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 EPXP11678 715 aa8.69□□□□□ -1.02
NEDD9-211ENST00000508546 ENDOUP21128 410 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms