RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 CDKL2Q92772 493 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 TSPAN17Q96FV3 270 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 MS4A3Q96HJ5 214 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 SEC16BQ96JE7 1060 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 MAGED4Q96JG8 741 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 QRFPRQ96P65 431 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 CPNE1Q99829 537 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 ERP44Q9BS26 406 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 NPLQ9BXD5 320 aaPredicted RBP12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 DEFB126Q9BYW3 111 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 PITHD1Q9GZP4 211 aaPredicted RBP12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 EHD1Q9H4M9 534 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 NT5DC2Q9H857 520 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 CNOT10Q9H9A5 744 aaKnown RBP12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 DNAJC11Q9NVH1 559 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 ZNF223Q9UK11 482 aaPredicted RBP12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 NPIPA1Q9UND3 350 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 PPIEQ9UNP9 301 aaKnown RBP12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 PDZD2O15018 2839 aa12.15□□□□□ -0.46
HMGCS1-205ENST00000508319 POLQO75417 2590 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 TRBV11-1A0A0K0K1C0 115 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 FAM187AA6NFU0 413 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 FAM159BA6NKW6 160 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 B3GALT2O43825 422 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 H2AFYO75367 372 aaKnown RBP12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 MLYCDO95822 493 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 STMN1P16949 149 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 ZNF24P17028 368 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 EPORP19235 508 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 CERS1P27544 350 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 PPP2R1BP30154 601 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 GP5P40197 560 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 HSPA7P48741 367 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 HLCSP50747 726 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 CASP6P55212 293 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 RAB38P57729 211 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 GPX6P59796 221 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 ATP6V0D1P61421 351 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 CALCOCO2Q13137 446 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 MAPKAPK3Q16644 382 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 CDKL4Q5MAI5 379 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 GPSM1Q86YR5 675 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 SPPL2CQ8IUH8 684 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 KRT78Q8N1N4 520 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 FAM47BQ8NA70 645 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 PDPRQ8NCN5 879 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 SPATA4Q8NEY3 305 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 OR2L5Q8NG80 312 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 CCT6BQ92526 530 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 NCLNQ969V3 563 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 ESAMQ96AP7 390 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 WDR34Q96EX3 536 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 FAR2Q96K12 515 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 UBXN10Q96LJ8 280 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 CSF3RQ99062 836 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 CAPS2Q9BXY5 557 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 REXO4Q9GZR2 422 aaKnown RBP12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 TXNDC16Q9P2K2 825 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 ASB1Q9Y576 335 aa12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 TEP1Q99973 2627 aaKnown RBP12.14□□□□□ -0.47
HMGCS1-205ENST00000508319 A0A088AWK7 358 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 CYR61O00622 381 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 FCHO1O14526 889 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 ASNA1O43681 348 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 STK16O75716 305 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 ZNF10P21506 573 aaPredicted RBP12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 TNFRSF8P28908 595 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 GMPRP36959 345 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 CLCN2P51788 898 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 GPR143P51810 404 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 PLA2G16P53816 162 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 LIM2P55344 173 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 HSD17B7P56937 341 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 HSF1Q00613 529 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 C2orf54Q08AI8 447 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 PDK4Q16654 411 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 SULT1C3Q6IMI6 304 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 TRIM40Q6P9F5 258 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 ABHD17CQ6PCB6 329 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 CYS1Q717R9 158 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 ADAMTS18Q8TE60 1221 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 KIAA1191Q96A73 305 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 TMEM125Q96AQ2 219 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 PTCD3Q96EY7 689 aaKnown RBP12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 VMP1Q96GC9 406 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 PHACTR1Q9C0D0 580 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 PRTFDC1Q9NRG1 225 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 PNO1Q9NRX1 252 aaKnown RBP12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 PTBP2Q9UKA9 531 aaKnown RBP12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 ZNF490Q9ULM2 529 aaPredicted RBP12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 DAPP1Q9UN19 280 aa12.13□□□□□ -0.47
HMGCS1-205ENST00000508319 ANKDD1BA6NHY2 528 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 CLGNO14967 610 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 ZNHIT1O43257 154 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 PRKNO60260 465 aaPredicted RBP12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 ITGA10O75578 1167 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 SLC35E2BP0CK96 405 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 TFEBP19484 476 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 HTR1EP28566 365 aa12.12□□□□□ -0.47
HMGCS1-205ENST00000508319 HPDP32754 393 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms