RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 PAQR3Q6TCH7 311 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 CBLN3Q6UW01 205 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 PRSS55Q6UWB4 352 aaPredicted RBP7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 LHFPL4Q7Z7J7 247 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 FBXL16Q8N461 479 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 ZNF276Q8N554 614 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 UBE2FQ969M7 185 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 MCHR2Q969V1 340 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 GLT1D1Q96MS3 346 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 MED10Q9BTT4 135 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 AMNQ9BXJ7 453 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 HAPLN2Q9GZV7 340 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 UPF3AQ9H1J1 476 aaKnown RBP7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 PPIL3Q9H2H8 161 aaKnown RBP7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 LRRN3Q9H3W5 708 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 SLC38A10Q9HBR0 1119 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 IMP3Q9NV31 184 aaKnown RBP7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 STOX2Q9P2F5 926 aaPredicted RBP7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 CTNNAL1Q9UBT7 734 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 RAB23Q9ULC3 237 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 FOXJ3Q9UPW0 622 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 SH3GLB1Q9Y371 365 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 KLF2Q9Y5W3 355 aaPredicted RBP7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 A0A1W2PP64 1363 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 CNTNAP4Q9C0A0 1308 aa7.14□□□□□ -1.27
PDGFRA-206ENST00000508170 E5RI56 91 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 KLRC4-KLRK1H3BQV0 150 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 LCMT2O60294 686 aaKnown RBP7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 SDC3O75056 442 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 LRP3O75074 770 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 H6PDO95479 791 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 FUCA1P04066 466 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 KRT16P08779 473 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 ACKR3P25106 362 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 CDAP32320 146 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 EPHX2P34913 555 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 ARHGAP1Q07960 439 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 CPSF6Q16630 551 aaKnown RBP eCLIP7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 YIF1BQ5BJH7 314 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 FAM47AQ5JRC9 791 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 PRR23BQ6ZRT6 265 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 MOB3CQ70IA8 216 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 SNX20Q7Z614 316 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 TRIM69Q86WT6 500 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 NATD1Q8N6N6 113 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 GATSQ8NAP1 163 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 LINC01599Q8WXQ3 324 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 DAZLQ92904 295 aaKnown RBP7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 TM4SF19Q96DZ7 209 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 CCDC42Q96M95 316 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 TOX2Q96NM4 488 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 HIST1H2AAQ96QV6 131 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 OLFM1Q99784 485 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 CPPED1Q9BRF8 314 aaPredicted RBP7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 C11orf84Q9BUA3 381 aaPredicted RBP7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 DGCR6LQ9BY27 220 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 RANBP3Q9H6Z4 567 aaPredicted RBP7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 NDE1Q9NXR1 346 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 MTMR4Q9NYA4 1195 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 PLEK2Q9NYT0 353 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 MYOTQ9UBF9 498 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 UPB1Q9UBR1 384 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 MAN1B1Q9UKM7 699 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 ARHGEF40Q8TER5 1519 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 MED14O60244 1454 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 CLTCQ00610 1675 aaKnown RBP7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 MTMR11A4FU01 709 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 SERPINE3A8MV23 424 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 ADM5C9JUS6 153 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 USP17L23D6RBM5 183 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 F8VP50 259 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 TOX3O15405 576 aaPredicted RBP7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 ERCC1P07992 297 aaPredicted RBP7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 SYPP08247 313 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 PSKH1P11801 424 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 CYP3A5P20815 502 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 HSD11B1P28845 292 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 P2RY2P41231 377 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 FMO5P49326 533 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 GK2Q14410 553 aaPredicted RBP7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 FASTKD3Q14CZ7 662 aaKnown RBP7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 DUPD1Q68J44 220 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 TMEM108Q6UXF1 575 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 SLC39A5Q6ZMH5 540 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 PDSS2Q86YH6 399 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 TMC8Q8IU68 726 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 DCUN1D3Q8IWE4 304 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 FAM89BQ8N5H3 189 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 MAB21L3Q8N8X9 362 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 CASKIN2Q8WXE0 1202 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 ST8SIA2Q92186 375 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 GTF2H4Q92759 462 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 ORAI1Q96D31 301 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 COQ2Q96H96 371 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 AJUBAQ96IF1 538 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 ZBTB45Q96K62 511 aaPredicted RBP7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 TSSK3Q96PN8 268 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 PLEKHF1Q96S99 279 aa7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 MTERF1Q99551 399 aaKnown RBP7.13□□□□□ -1.27
PDGFRA-206ENST00000508170 ADAM2Q99965 735 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms