RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 PLPP1O14494 284 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 B4GALT2O60909 372 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 SPAG7O75391 227 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 OR4F21O95013 312 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 SCELO95171 688 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 HPP00738 406 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 ZNF10P21506 573 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 ATP5A1P25705 553 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 HNRNPFP52597 415 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 SOX8P57073 446 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 TGM3Q08188 693 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 PCLAFQ15004 111 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 LACTB2Q53H82 288 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 FRG2Q64ET8 278 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 TCTN3Q6NUS6 607 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 CHSY3Q70JA7 882 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 ANKRD37Q7Z713 158 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 TMEM52Q8NDY8 209 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 PLPP5Q8NEB5 264 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 RDH11Q8TC12 318 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 PPP4R1Q8TF05 950 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 MTFMTQ96DP5 389 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 FRG2BQ96QU4 278 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 CSF3RQ99062 836 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 TBCDQ9BTW9 1192 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 ZNF717Q9BY31 904 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 ZNF700Q9H0M5 742 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 COPS7BQ9H9Q2 264 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 ZNF160Q9HCG1 818 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 PRM3Q9NNZ6 103 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 FARSBQ9NSD9 589 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 SLC17A7Q9P2U7 560 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 TRPS1Q9UHF7 1281 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 PPT2Q9UMR5 302 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 SPTA1P02549 2419 aa17.17■□□□□ 0.34
PDLIM7-216ENST00000506537 CCDC151A5D8V7 595 aa17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 EIF4E1BA6NMX2 242 aaKnown RBP17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 FOXE1O00358 373 aaPredicted RBP17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 PCDH17O14917 1159 aa17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 CPA3P15088 417 aa17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 HIST1H1TP22492 207 aaPredicted RBP17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 JAK1P23458 1154 aa17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 LIM2P55344 173 aa17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 RAB38P57729 211 aa17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 DNAJB13P59910 316 aa17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 BTG2P78543 158 aa17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 NFATC3Q12968 1075 aa17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 LCP2Q13094 533 aa17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 AIMP2Q13155 320 aaKnown RBP17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 ABRAXAS2Q15018 415 aa17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 TCHHL1Q5QJ38 904 aaPredicted RBP17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 BEND6Q5SZJ8 279 aaPredicted RBP17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 NDUFAF7Q7L592 441 aa17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 PARP9Q8IXQ6 854 aa17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 ACOT4Q8N9L9 421 aa17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 CCDC63Q8NA47 563 aa17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 FAM47BQ8NA70 645 aa17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 SRFBP1Q8NEF9 429 aaKnown RBP17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 ARMC2Q8NEN0 867 aa17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 METTL21AQ8WXB1 218 aa17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 CCDC126Q96EE4 140 aa17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 WDR77Q9BQA1 342 aaPredicted RBP17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 ATP13A2Q9NQ11 1180 aa17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 OXSMQ9NWU1 459 aa17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 GPR83Q9NYM4 423 aa17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 KCMF1Q9P0J7 381 aa17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 DAPP1Q9UN19 280 aa17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 SETXQ7Z333 2677 aaKnown RBP17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 DOCK10Q96BY6 2186 aa17.16■□□□□ 0.34
PDLIM7-216ENST00000506537 IGKV3D-11A0A0A0MRZ8 115 aa17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 NSG1A0A0A6YYJ2 146 aa17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 TGFBR3LH3BV60 316 aa17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 PSMD12O00232 456 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 CYR61O00622 381 aa17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 UBFD1O14562 309 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 CELA2AP08217 269 aa17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 MAOAP21397 527 aa17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 PTX3P26022 381 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 SSR2P43308 183 aa17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 NAGLUP54802 743 aa17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 PHEXP78562 749 aa17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 CUL3Q13618 768 aa17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 MYBPC3Q14896 1274 aa17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 CEP85LQ5SZL2 805 aa17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 TTC19Q6DKK2 380 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 OR4C11Q6IEV9 310 aa17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 QSOX2Q6ZRP7 698 aa17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 GPRIN3Q6ZVF9 776 aa17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 CPEB2Q7Z5Q1 589 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 C10orf107Q8IVU9 208 aa17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 CCNYL1Q8N7R7 359 aa17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 CDYL2Q8N8U2 506 aa17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 RGMAQ96B86 450 aa17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 VPS50Q96JG6 964 aa17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 IMMP1LQ96LU5 166 aa17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 MAGEB10Q96LZ2 347 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 FAM111AQ96PZ2 611 aa17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 MAPKAP1Q9BPZ7 522 aa17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 ROGDIQ9GZN7 287 aa17.15■□□□□ 0.34
PDLIM7-216ENST00000506537 PSD3Q9NYI0 1048 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms