RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 SDR42E2A6NKP2 422 aa5.22□□□□□ -1.57
HERC4-213ENST00000506515 CRCPO75575 148 aa5.22□□□□□ -1.57
HERC4-213ENST00000506515 SLC16A8O95907 504 aa5.22□□□□□ -1.57
HERC4-213ENST00000506515 FRKP42685 505 aaPredicted RBP5.22□□□□□ -1.57
HERC4-213ENST00000506515 OR3A1P47881 315 aa5.22□□□□□ -1.57
HERC4-213ENST00000506515 GLIPR1P48060 266 aa5.22□□□□□ -1.57
HERC4-213ENST00000506515 ASIC1P78348 528 aa5.22□□□□□ -1.57
HERC4-213ENST00000506515 HNRNPDQ14103 355 aaKnown RBP5.22□□□□□ -1.57
HERC4-213ENST00000506515 TRIM29Q14134 588 aa5.22□□□□□ -1.57
HERC4-213ENST00000506515 KBTBD12Q3ZCT8 623 aa5.22□□□□□ -1.57
HERC4-213ENST00000506515 HSP90AB3PQ58FF7 597 aa5.22□□□□□ -1.57
HERC4-213ENST00000506515 SLC25A47Q6Q0C1 308 aa5.22□□□□□ -1.57
HERC4-213ENST00000506515 NHLRC1Q6VVB1 395 aa5.22□□□□□ -1.57
HERC4-213ENST00000506515 KIF6Q6ZMV9 814 aa5.22□□□□□ -1.57
HERC4-213ENST00000506515 SLC24A5Q71RS6 500 aa5.22□□□□□ -1.57
HERC4-213ENST00000506515 CPEB2Q7Z5Q1 589 aaKnown RBP5.22□□□□□ -1.57
HERC4-213ENST00000506515 GPR141Q7Z602 305 aa5.22□□□□□ -1.57
HERC4-213ENST00000506515 CCDC60Q8IWA6 550 aaPredicted RBP5.22□□□□□ -1.57
HERC4-213ENST00000506515 ATG101Q9BSB4 218 aa5.22□□□□□ -1.57
HERC4-213ENST00000506515 ALKBH7Q9BT30 221 aaPredicted RBP5.22□□□□□ -1.57
HERC4-213ENST00000506515 CACNG6Q9BXT2 260 aa5.22□□□□□ -1.57
HERC4-213ENST00000506515 PITPNM3Q9BZ71 974 aa5.22□□□□□ -1.57
HERC4-213ENST00000506515 SLC12A6Q9UHW9 1150 aa5.22□□□□□ -1.57
HERC4-213ENST00000506515 PA2G4Q9UQ80 394 aaKnown RBP5.22□□□□□ -1.57
HERC4-213ENST00000506515 NUDCQ9Y266 331 aa5.22□□□□□ -1.57
HERC4-213ENST00000506515 COLEC10Q9Y6Z7 277 aa5.22□□□□□ -1.57
HERC4-213ENST00000506515 NPC1L1Q9UHC9 1359 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 TRBV4-1A0A0J9YWV2 114 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 ILVBLA1L0T0 632 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 PRR23AA6NEV1 266 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 NPIPA3F8WFD2 350 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 ZNF195O14628 629 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 SEC24AO95486 1093 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 PRKAR1AP10644 381 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 CYP2A7P20853 494 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 SNU13P55769 128 aaKnown RBP5.21□□□□□ -1.58
HERC4-213ENST00000506515 CLDN17P56750 224 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 GNB1P62873 340 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 C17orf67Q0P5P2 114 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 TEAD2Q15562 447 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 ZNF74Q16587 644 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 MTHFSDQ2M296 383 aaKnown RBP5.21□□□□□ -1.58
HERC4-213ENST00000506515 KRTAP24-1Q3LI83 254 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 ODF2Q5BJF6 829 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 ZNF542PQ5EBM4 170 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 SLC10A5Q5PT55 438 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 C9orf50Q5SZB4 431 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 ARHGAP17Q68EM7 881 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 PSRC1Q6PGN9 363 aaPredicted RBP5.21□□□□□ -1.58
HERC4-213ENST00000506515 PTAR1Q7Z6K3 402 aaPredicted RBP5.21□□□□□ -1.58
HERC4-213ENST00000506515 PRUNE1Q86TP1 453 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 AQP12AQ8IXF9 295 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 PRSS35Q8N3Z0 413 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 RAB42Q8N4Z0 105 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 ZNF713Q8N859 430 aaPredicted RBP5.21□□□□□ -1.58
HERC4-213ENST00000506515 TMEM190Q8WZ59 177 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 MAGED4Q96JG8 741 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 TSSK2Q96PF2 358 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 ZNF350Q9GZX5 532 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 P2RY12Q9H244 342 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 PNNQ9H307 717 aaKnown RBP5.21□□□□□ -1.58
HERC4-213ENST00000506515 EGLN3Q9H6Z9 239 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 C10orf88Q9H8K7 445 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 MAN2C1Q9NTJ4 1040 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 PRDM4Q9UKN5 801 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 AGTPBP1Q9UPW5 1226 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 WDR37Q9Y2I8 494 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 SCN11AQ9UI33 1791 aa5.21□□□□□ -1.58
HERC4-213ENST00000506515 ARID2Q68CP9 1835 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 ANKRD26Q9UPS8 1709 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 NOTCH4Q99466 2003 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 ADAMTSL1Q8N6G6 1762 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 A0A087WUV0 522 aaPredicted RBP5.2□□□□□ -1.58
HERC4-213ENST00000506515 A0A087WW49 117 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 LRRD1A4D1F6 860 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 TEX28O15482 410 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 GRID2O43424 1007 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 GOSR1O95249 250 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 PAK4O96013 591 aaPredicted RBP5.2□□□□□ -1.58
HERC4-213ENST00000506515 C8orf89P0DMQ9 161 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 CD59P13987 128 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 GOT1P17174 413 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 SNRPD1P62314 119 aaKnown RBP5.2□□□□□ -1.58
HERC4-213ENST00000506515 ABRQ12979 859 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 TMEM132DQ14C87 1099 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 PTPN14Q15678 1187 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 KCTD9Q7L273 389 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 CCDC83Q8IWF9 413 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 UNC45BQ8IWX7 931 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 C10orf53Q8N6V4 93 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 AMER3Q8N944 861 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 DDHD1Q8NEL9 900 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 OR5AP2Q8NGF4 316 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 FAM76AQ8TAV0 307 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 CKAP2Q8WWK9 683 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 LRR1Q96L50 414 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 CFAP53Q96M91 514 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 NKX3-1Q99801 234 aaPredicted RBP5.2□□□□□ -1.58
HERC4-213ENST00000506515 FUCA2Q9BTY2 467 aa5.2□□□□□ -1.58
HERC4-213ENST00000506515 UBQLN3Q9H347 655 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms