RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 EPS8L2Q9H6S3 715 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 ANKMY1Q9P2S6 941 aa16.47■□□□□ 0.23
TRAPPC11-204ENST00000505676 A0A0A6YYD5 115 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 LRIT2A6NDA9 550 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 ADAMDEC1O15204 470 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 LATO43561 262 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 HLCSP50747 726 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 CYP4F2P78329 520 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 ENPP7Q6UWV6 458 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 ZFAND2BQ8WV99 257 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 HDAC2Q92769 488 aaKnown RBP16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 KCNC2Q96PR1 638 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 RBM38Q9H0Z9 239 aaKnown RBP16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 SLC6A17Q9H1V8 727 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 PTTG2Q9NZH5 202 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 MTCH2Q9Y6C9 303 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 TMEM265A0A087WTH1 108 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 ZNF701M0R085 212 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 IGLV3-19P01714 112 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 NDUFV2P19404 249 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 RYKP34925 604 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 ANXA11P50995 505 aaKnown RBP16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 PCBP4P57723 403 aaKnown RBP16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 GABARAPL2P60520 117 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 CDK6Q00534 326 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 IFI44LQ53G44 452 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 SAXO2Q658L1 398 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 AMIGO1Q86WK6 493 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 SLC44A3Q8N4M1 653 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 MFSD9Q8NBP5 474 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 FAM174AQ8TBP5 190 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 FZD3Q9NPG1 666 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 PRDM8Q9NQV8 689 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 THSD1Q9NS62 852 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 PCDHGB3Q9Y5G1 929 aa16.46■□□□□ 0.23
TRAPPC11-204ENST00000505676 IGKV1-8A0A0C4DH67 115 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 FEZF1A0PJY2 475 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 A8MVJ9 347 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 C10orf142B7Z368 130 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 HS6ST1O60243 411 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 PDE9AO76083 593 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 C9P02748 559 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 IGFBP5P24593 272 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 GSTT1P30711 240 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 SOAT1P35610 550 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 SSR2P43308 183 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 TPMTP51580 245 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 CCR5P51681 352 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 MANFP55145 182 aaKnown RBP16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 TPD52P55327 224 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 DSTNP60981 165 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 STXBP1P61764 594 aaKnown RBP16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 KCNJ10P78508 379 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 EEF1A2Q05639 463 aaKnown RBP16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 KIR2DS3Q14952 304 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 DCP2Q8IU60 420 aaKnown RBP16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 ADGRF3Q8IZF5 1079 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 RPLP0P6Q8NHW5 317 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 OR1E3Q8WZA6 343 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 A4GALTQ9NPC4 353 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 GPATCH2Q9NW75 528 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 UTS2RQ9UKP6 389 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 JRKO75564 520 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 ETFAP13804 333 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 EFNA1P20827 205 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 RABIFP47224 123 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 RPS15AP62244 130 aaKnown RBP16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 KEAP1Q14145 624 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 SLC9A5Q14940 896 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 SLC5A12Q1EHB4 618 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 IER5LQ5T953 404 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 ZNF425Q6IV72 752 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 RBM44Q6ZP01 1051 aaKnown RBP16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 ARMC8Q8IUR7 673 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 GALNT15Q8N3T1 639 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 OR2L5Q8NG80 312 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 LCN9Q8WX39 176 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 GEMIN6Q8WXD5 167 aaKnown RBP16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 C7orf34Q96L11 122 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 MUS81Q96NY9 551 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 MBOAT4Q96T53 435 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 TUBA1CQ9BQE3 449 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 TRIM4Q9C037 500 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 ROGDIQ9GZN7 287 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 TWSG1Q9GZX9 223 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 KCNK12Q9HB15 430 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 POLMQ9NP87 494 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 LHX9Q9NQ69 397 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 DNAAF2Q9NVR5 837 aaKnown RBP16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 USP36Q9P275 1121 aaKnown RBP16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 RAPGEFL1Q9UHV5 662 aa16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 SAMHD1Q9Y3Z3 626 aaKnown RBP16.45■□□□□ 0.22
TRAPPC11-204ENST00000505676 FAM221BA6H8Z2 402 aa16.44■□□□□ 0.22
TRAPPC11-204ENST00000505676 POM121BA6NF01 834 aa16.44■□□□□ 0.22
TRAPPC11-204ENST00000505676 OR52A4PA6NMU1 304 aa16.44■□□□□ 0.22
TRAPPC11-204ENST00000505676 NUDT7P0C024 238 aa16.44■□□□□ 0.22
TRAPPC11-204ENST00000505676 PCBP3P57721 371 aaKnown RBP16.44■□□□□ 0.22
TRAPPC11-204ENST00000505676 VLDLRP98155 873 aa16.44■□□□□ 0.22
TRAPPC11-204ENST00000505676 KCNAB2Q13303 367 aa16.44■□□□□ 0.22
TRAPPC11-204ENST00000505676 CCINQ13939 588 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms