RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 LCN10Q6JVE6 187 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 CYP20A1Q6UW02 462 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 KIRREL2Q6UWL6 708 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 IGFL3Q6UXB1 125 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 ZYG11AQ6WRX3 759 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 CPEB2Q7Z5Q1 589 aaKnown RBP9.3□□□□□ -0.92
NR1I3-220ENST00000505005 TRABD2AQ86V40 505 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 NUDT13Q86X67 352 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 LGI4Q8N135 537 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 TMEM132CQ8N3T6 1108 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 OR11G2Q8NGC1 345 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 HUS1BQ8NHY5 278 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 SUN3Q8TAQ9 357 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 ZNF483Q8TF39 744 aaPredicted RBP9.3□□□□□ -0.92
NR1I3-220ENST00000505005 MZB1Q8WU39 189 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 DAZLQ92904 295 aaKnown RBP9.3□□□□□ -0.92
NR1I3-220ENST00000505005 ESAMQ96AP7 390 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 PGM2Q96G03 612 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 ABHD17AQ96GS6 310 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 APOPT1Q96IL0 206 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 ZNF354BQ96LW1 612 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 ZNF700Q9H0M5 742 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 MLXIPLQ9NP71 852 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 OXSMQ9NWU1 459 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 FAM53CQ9NYF3 392 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 CTSFQ9UBX1 484 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 ZNF490Q9ULM2 529 aaPredicted RBP9.3□□□□□ -0.92
NR1I3-220ENST00000505005 DAPP1Q9UN19 280 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 SH2B3Q9UQQ2 575 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 PLAAQ9Y263 795 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 PLLPQ9Y342 182 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 HS3ST3B1Q9Y662 390 aa9.3□□□□□ -0.92
NR1I3-220ENST00000505005 DSPP15924 2871 aaKnown RBP9.3□□□□□ -0.92
NR1I3-220ENST00000505005 IGHV1-45A0A0A0MS14 117 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 DYTNA2CJ06 578 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 SMIM23A6NLE4 172 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 SOCS6O14544 535 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 PLIN3O60664 434 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 CTNSO60931 367 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 RDH16O75452 317 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 MYO1DO94832 1006 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 ESRRBO95718 433 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 SHBGP04278 402 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 CTSBP07858 339 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 PLA2G16P53816 162 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 RAB8AP61006 207 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 STX4Q12846 297 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 SRSF6Q13247 344 aaKnown RBP9.29□□□□□ -0.92
NR1I3-220ENST00000505005 ATP1A4Q13733 1029 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 ZRSR2Q15696 482 aaKnown RBP9.29□□□□□ -0.92
NR1I3-220ENST00000505005 SPIN4Q56A73 249 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 PLAG1Q6DJT9 500 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 ISLR2Q6UXK2 745 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 ATG14Q6ZNE5 492 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 GPRIN3Q6ZVF9 776 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 ASB18Q6ZVZ8 466 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 PPP1R32Q7Z5V6 425 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 ZNF605Q86T29 641 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 ZC3H7AQ8IWR0 971 aaKnown RBP9.29□□□□□ -0.92
NR1I3-220ENST00000505005 PARP9Q8IXQ6 854 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 GSPT2Q8IYD1 628 aaKnown RBP9.29□□□□□ -0.92
NR1I3-220ENST00000505005 SLC5A8Q8N695 610 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 METTL27Q8N6F8 245 aaPredicted RBP9.29□□□□□ -0.92
NR1I3-220ENST00000505005 FAM76AQ8TAV0 307 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 WDR20Q8TBZ3 569 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 METTL6Q8TCB7 284 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 SELENOMQ8WWX9 145 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 PEX11GQ96HA9 241 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 PTCHD1Q96NR3 888 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 FAIM2Q9BWQ8 316 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 VN1R1Q9GZP7 353 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 SEMA4BQ9NPR2 832 aaPredicted RBP9.29□□□□□ -0.92
NR1I3-220ENST00000505005 DMRT3Q9NQL9 472 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 PRTFDC1Q9NRG1 225 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 VPS29Q9UBQ0 182 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 FBXL4Q9UKA2 621 aa9.29□□□□□ -0.92
NR1I3-220ENST00000505005 MRPS2Q9Y399 296 aaKnown RBP9.29□□□□□ -0.92
NR1I3-220ENST00000505005 GOLGA8RI6L899 631 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 BIRC5O15392 142 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 NRP2O60462 931 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 DLX3O60479 287 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 SASH3O75995 380 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 ZWINTO95229 277 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 SIX3O95343 332 aaPredicted RBP9.28□□□□□ -0.92
NR1I3-220ENST00000505005 TGFB1P01137 390 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 PROCP04070 461 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 FAM87AP0C7U9 286 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 EPORP19235 508 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 CPN2P22792 545 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 ATP5A1P25705 553 aaKnown RBP9.28□□□□□ -0.92
NR1I3-220ENST00000505005 GALNSP34059 522 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 CASRP41180 1078 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 SLC18A1P54219 525 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 OR4D2P58180 307 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 TBL3Q12788 808 aaKnown RBP9.28□□□□□ -0.92
NR1I3-220ENST00000505005 HYAL2Q12891 473 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 SLC13A2Q13183 592 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 ABRAXAS2Q15018 415 aa9.28□□□□□ -0.92
NR1I3-220ENST00000505005 C18orf21Q32NC0 220 aaPredicted RBP9.28□□□□□ -0.92
NR1I3-220ENST00000505005 SOWAHCQ53LP3 525 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms