RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 BCLAF3A2AJT9 711 aaKnown RBP6.04□□□□□ -1.44
CLCN3-204ENST00000504131 NME2P1O60361 137 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 MT-ND5P03915 603 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 SLC35G4P0C7Q5 338 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 HOXB8P17481 243 aaPredicted RBP6.04□□□□□ -1.44
CLCN3-204ENST00000504131 RAB28P51157 221 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 PPP5CP53041 499 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 HUNKP57058 714 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 OR5I1Q13606 314 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 CASP12Q6UXS9 341 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 HSDL2Q6YN16 418 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 SGMS1Q86VZ5 419 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 SERPINA9Q86WD7 417 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 SLITRK4Q8IW52 837 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 DEFB107AQ8IZN7 70 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 MYLIPQ8WY64 445 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 FUBP3Q96I24 572 aaKnown RBP eCLIP6.04□□□□□ -1.44
CLCN3-204ENST00000504131 RDH12Q96NR8 316 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 PISDQ9UG56 409 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 CEPT1Q9Y6K0 416 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 GRM8O00222 908 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 PDHXO00330 501 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 ARHGAP33O14559 1287 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 NDST3O95803 873 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 CTSAP10619 480 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 ZNF26P17031 533 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-204ENST00000504131 FGF7P21781 194 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 GPR4P46093 362 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 ACSM1Q08AH1 577 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 SELENBP1Q13228 472 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 ENPP2Q13822 863 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 ACER2Q5QJU3 275 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 TANGO2Q6ICL3 276 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 PQLC1Q8N2U9 271 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 MITD1Q8WV92 249 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 LARP4BQ92615 738 aaKnown RBP6.03□□□□□ -1.44
CLCN3-204ENST00000504131 RPL10LQ96L21 214 aaKnown RBP6.03□□□□□ -1.44
CLCN3-204ENST00000504131 COQ10AQ96MF6 247 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 SLC6A7Q99884 636 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 ZNF577Q9BSK1 485 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 TMEM121Q9BTD3 319 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 MIR1-1HGQ9H1L0 117 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 MIEF1Q9NQG6 463 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 C1GALT1Q9NS00 363 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 MS4A12Q9NXJ0 267 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 KCMF1Q9P0J7 381 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 PCDHA6Q9UN73 950 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 PCDHA4Q9UN74 947 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 CDC14AQ9UNH5 594 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 PCDHA9Q9Y5H5 950 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 PCDHA8Q9Y5H6 950 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 PCDHA13Q9Y5I0 950 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 CLTCL1P53675 1640 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 PQLC2LA1A4F0 135 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 OR5K3A6NET4 321 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 SURF4O15260 269 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 ZNF207O43670 478 aaKnown RBP6.03□□□□□ -1.44
CLCN3-204ENST00000504131 SCO2O43819 266 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 HS6ST1O60243 411 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 ZNF821O75541 412 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-204ENST00000504131 KAT7O95251 611 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 TNFRSF6BO95407 300 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 SOD2P04179 222 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 ITGB2P05107 769 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 SERPINA6P08185 405 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 CTPS1P17812 591 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 TRHRP34981 398 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-204ENST00000504131 SLC11A1P49279 550 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 RORCP51449 518 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 METAP1P53582 386 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 SUCLG1P53597 346 aaKnown RBP6.03□□□□□ -1.44
CLCN3-204ENST00000504131 ARSFP54793 590 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 PITPNAQ00169 270 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 MEF2AQ02078 507 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-204ENST00000504131 SP2Q02086 613 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 GAD2Q05329 585 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 EML3Q32P44 896 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 NCMAPQ5T1S8 102 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 SUSD1Q6UWL2 747 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 THSD4Q6ZMP0 1018 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 DPY19L4Q7Z388 723 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 ILDR1Q86SU0 546 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-204ENST00000504131 SORCS2Q96PQ0 1159 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 ARV1Q9H2C2 271 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 FN3KQ9H479 309 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 MANSC1Q9H8J5 431 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 IPPKQ9H8X2 491 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 MKKSQ9NPJ1 570 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-204ENST00000504131 C14orf119Q9NWQ9 140 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 GAR1Q9NY12 217 aaKnown RBP6.03□□□□□ -1.44
CLCN3-204ENST00000504131 SAE1Q9UBE0 346 aaPredicted RBP6.03□□□□□ -1.44
CLCN3-204ENST00000504131 TINAGQ9UJW2 476 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 FBXL3Q9UKT7 428 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 MYOM1P52179 1685 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 MYO5BQ9ULV0 1848 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 A0A087WZY1 265 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 TCRBV21S2A2A0A5A6 115 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 PRORSD1PA6NEY8 169 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 ERVV-1B6SEH8 477 aa6.03□□□□□ -1.44
CLCN3-204ENST00000504131 MCIDASD6RGH6 385 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms