RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.96□□□□□ -1.62
CLDND1-208ENST00000503004 A0A1W2PRG6 482 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 LINC00862A6NCI5 91 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 MANBAO00462 879 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 TFECO14948 347 aaPredicted RBP4.96□□□□□ -1.62
CLDND1-208ENST00000503004 GSTA4O15217 222 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 PRAMEF4O60810 478 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 SH3BGRLO75368 114 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 CLDN9O95484 217 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 POP4O95707 220 aaKnown RBP4.96□□□□□ -1.62
CLDND1-208ENST00000503004 CST1P01037 141 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 ALBP02768 609 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 ALPLP05186 524 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 ANXA5P08758 320 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 EBLN1P0CF75 366 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 RAP2AP10114 183 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 IL7P13232 177 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 ITPKAP23677 461 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 SHMT2P34897 504 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 PIGAP37287 484 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 CDKN2CP42773 168 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 TPMTP51580 245 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 SNRPD2P62316 118 aaKnown RBP4.96□□□□□ -1.62
CLDND1-208ENST00000503004 HTRA3P83110 453 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 CHRNB3Q05901 458 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 EPS8Q12929 822 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 SLC14A1Q13336 389 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 EFR3AQ14156 821 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 ZNF273Q14593 569 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 LAPTM4AQ15012 233 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 ACOX1Q15067 660 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 SF1Q15637 639 aaKnown RBP4.96□□□□□ -1.62
CLDND1-208ENST00000503004 GFOD2Q3B7J2 385 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 PTCHD3Q3KNS1 767 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 ADPRMQ3LIE5 342 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 SPATS1Q496A3 300 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 FAM98BQ52LJ0 330 aaKnown RBP4.96□□□□□ -1.62
CLDND1-208ENST00000503004 USP39Q53GS9 565 aaKnown RBP4.96□□□□□ -1.62
CLDND1-208ENST00000503004 PDSS1Q5T2R2 415 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 ZNF648Q5T619 568 aaPredicted RBP4.96□□□□□ -1.62
CLDND1-208ENST00000503004 PRAMEF9Q5VWM5 478 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 ASTLQ6HA08 431 aaPredicted RBP4.96□□□□□ -1.62
CLDND1-208ENST00000503004 SYCE2Q6PIF2 218 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 ZNF773Q6PK81 442 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 MACC1Q6ZN28 852 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 LINC00299Q6ZSB3 139 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 UBE2R2Q712K3 238 aaPredicted RBP4.96□□□□□ -1.62
CLDND1-208ENST00000503004 GALNT10Q86SR1 603 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 TMEM25Q86YD3 366 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 CHST14Q8NCH0 376 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 ZNF680Q8NEM1 530 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 ST13P5Q8NFI4 369 aaPredicted RBP4.96□□□□□ -1.62
CLDND1-208ENST00000503004 ZFAND1Q8TCF1 268 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 SLC22A17Q8WUG5 538 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 IPCEF1Q8WWN9 437 aaPredicted RBP4.96□□□□□ -1.62
CLDND1-208ENST00000503004 SELENOMQ8WWX9 145 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 MRPS31Q92665 395 aaKnown RBP4.96□□□□□ -1.62
CLDND1-208ENST00000503004 RPL3LQ92901 407 aaKnown RBP4.96□□□□□ -1.62
CLDND1-208ENST00000503004 NCLNQ969V3 563 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 PHF21AQ96BD5 680 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 PAWRQ96IZ0 340 aaKnown RBP4.96□□□□□ -1.62
CLDND1-208ENST00000503004 ITCHQ96J02 903 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 KLHL15Q96M94 604 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 ZBTB18Q99592 522 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 INPP5KQ9BT40 448 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 NTMT1Q9BV86 223 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 SLC46A2Q9BY10 475 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 C6orf62Q9GZU0 229 aaPredicted RBP4.96□□□□□ -1.62
CLDND1-208ENST00000503004 RNF208Q9H0X6 261 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 MUC13Q9H3R2 512 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 MTG2Q9H4K7 406 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 SUV39H2Q9H5I1 410 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 HCFC1R1Q9NWW0 138 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 COA4Q9NYJ1 87 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 AASSQ9UDR5 926 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 LSM7Q9UK45 103 aaKnown RBP4.96□□□□□ -1.62
CLDND1-208ENST00000503004 INVSQ9Y283 1065 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 PCDHB14Q9Y5E9 798 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 MN1Q10571 1320 aaPredicted RBP4.96□□□□□ -1.62
CLDND1-208ENST00000503004 ELOVL7A1L3X0 281 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 TMEM202A6NGA9 273 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 OR2AG2A6NM03 316 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 AGAP14A8MT82 685 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 NEDD8-MDP1E9PL57 170 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 LEFTY2O00292 366 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 SOCS5O75159 536 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 WDR47O94967 919 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 EFNA1P20827 205 aaPredicted RBP4.96□□□□□ -1.62
CLDND1-208ENST00000503004 AGXTP21549 392 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 MAOBP27338 520 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 CCR2P41597 374 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 PPP3CCP48454 512 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 CYP4F2P78329 520 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 RPP38P78345 283 aaKnown RBP4.96□□□□□ -1.62
CLDND1-208ENST00000503004 ADARB1P78563 741 aaKnown RBP4.96□□□□□ -1.62
CLDND1-208ENST00000503004 ALDH6A1Q02252 535 aaKnown RBP4.96□□□□□ -1.62
CLDND1-208ENST00000503004 PCDH1Q08174 1060 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 LRRC74AQ0VAA2 488 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 MEP1AQ16819 746 aa4.96□□□□□ -1.62
CLDND1-208ENST00000503004 ZNF181Q2M3W8 571 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms