RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 PCDHGA7Q9Y5G6 932 aa12.85□□□□□ -0.35
CPNE1-227ENST00000498056 WDFY3Q8IZQ1 3526 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 A0A0A6YYD5 115 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 GMNCA6NCL1 334 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 TRABD2BA6NFA1 517 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 C9J4A7 227 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 E9PBE3 544 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 MEN1O00255 615 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 ZNF195O14628 629 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 NVLO15381 856 aaKnown RBP12.84□□□□□ -0.35
CPNE1-227ENST00000498056 TMPRSS11DO60235 418 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 KLHL41O60662 606 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 RAD1O60671 282 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 SCELO95171 688 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 TGDSO95455 350 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 SMIM10L1P0DMW3 83 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 LBPP18428 481 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 AGXTP21549 392 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 MAPK1P28482 360 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 TPP2P29144 1249 aaPredicted RBP12.84□□□□□ -0.35
CPNE1-227ENST00000498056 ARFIP1P53367 373 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 ERVK-8P63133 956 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 RAE1P78406 368 aaKnown RBP12.84□□□□□ -0.35
CPNE1-227ENST00000498056 DCDP81605 110 aaKnown RBP12.84□□□□□ -0.35
CPNE1-227ENST00000498056 DSG2Q14126 1118 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 RTP5Q14D33 572 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 NKAIN1Q4KMZ8 207 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 RFTN2Q52LD8 501 aaPredicted RBP12.84□□□□□ -0.35
CPNE1-227ENST00000498056 C6orf136Q5SQH8 315 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 MFSD4BQ5TF39 518 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 IGF2-ASQ6U949 168 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 EPGNQ6UW88 154 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 C6orf15Q6UXA7 325 aaPredicted RBP12.84□□□□□ -0.35
CPNE1-227ENST00000498056 COX15Q7KZN9 410 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 CPLX4Q7Z7G2 160 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 NLGN4XQ8N0W4 816 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 CA13Q8N1Q1 262 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 ZCCHC7Q8N3Z6 543 aaKnown RBP12.84□□□□□ -0.35
CPNE1-227ENST00000498056 NLGN4YQ8NFZ3 816 aaPredicted RBP12.84□□□□□ -0.35
CPNE1-227ENST00000498056 CLHC1Q8NHS4 586 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 CHTF18Q8WVB6 975 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 PEX11GQ96HA9 241 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 SMIM10Q96HG1 83 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 MARK4Q96L34 752 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 LRFN5Q96NI6 719 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 OR52B2Q96RD2 323 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 CSF3RQ99062 836 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 LYARQ9NX58 379 aaKnown RBP12.84□□□□□ -0.35
CPNE1-227ENST00000498056 IFT80Q9P2H3 777 aaPredicted RBP12.84□□□□□ -0.35
CPNE1-227ENST00000498056 TRPC4Q9UBN4 977 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 CTSFQ9UBX1 484 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 GPN3Q9UHW5 284 aaPredicted RBP12.84□□□□□ -0.35
CPNE1-227ENST00000498056 MCM8Q9UJA3 840 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 ADAM29Q9UKF5 820 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 FBXW2Q9UKT8 454 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 DLGAP4Q9Y2H0 992 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 TMED5Q9Y3A6 229 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 MSRB2Q9Y3D2 182 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 SPACA6W5XKT8 324 aa12.84□□□□□ -0.35
CPNE1-227ENST00000498056 NPIPB8E9PQR5 432 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 PSMD12O00232 456 aaPredicted RBP12.83□□□□□ -0.36
CPNE1-227ENST00000498056 SHOX2O60902 331 aaPredicted RBP12.83□□□□□ -0.36
CPNE1-227ENST00000498056 DXOO77932 396 aaKnown RBP12.83□□□□□ -0.36
CPNE1-227ENST00000498056 ANXA4P09525 319 aaPredicted RBP12.83□□□□□ -0.36
CPNE1-227ENST00000498056 CCNYL3P0C7X3 344 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 PRR35P0CG20 571 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 NR2F6P10588 404 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 SDC1P18827 310 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 DRD4P21917 467 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 CD82P27701 267 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 XCR1P46094 333 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 IDH3AP50213 366 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 HNRNPH2P55795 449 aaKnown RBP12.83□□□□□ -0.36
CPNE1-227ENST00000498056 RAB38P57729 211 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 TNFRSF17Q02223 184 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 MAD2L1Q13257 205 aaPredicted RBP12.83□□□□□ -0.36
CPNE1-227ENST00000498056 SLAMF1Q13291 335 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 TUBB8Q3ZCM7 444 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 ZNF385CQ66K41 422 aaPredicted RBP12.83□□□□□ -0.36
CPNE1-227ENST00000498056 NOXRED1Q6NXP6 359 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 FAM199XQ6PEV8 388 aaPredicted RBP12.83□□□□□ -0.36
CPNE1-227ENST00000498056 FAM198BQ6UWH4 519 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 RIPOR1Q6ZS17 1223 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 SPATA21Q7Z572 469 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 PRSS58Q8IYP2 241 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 LIX1Q8N485 282 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 ESX1Q8N693 406 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 MAELQ96JY0 434 aaKnown RBP12.83□□□□□ -0.36
CPNE1-227ENST00000498056 RILPQ96NA2 401 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 TSSK3Q96PN8 268 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 MAPKAP1Q9BPZ7 522 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 DPH2Q9BQC3 489 aaPredicted RBP12.83□□□□□ -0.36
CPNE1-227ENST00000498056 B3GNT4Q9C0J1 378 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 CHST8Q9H2A9 424 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 DDX31Q9H8H2 851 aaKnown RBP12.83□□□□□ -0.36
CPNE1-227ENST00000498056 TEX10Q9NXF1 929 aaPredicted RBP12.83□□□□□ -0.36
CPNE1-227ENST00000498056 NOP53Q9NZM5 478 aaKnown RBP12.83□□□□□ -0.36
CPNE1-227ENST00000498056 KLHL14Q9P2G3 628 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 PHF11Q9UIL8 331 aa12.83□□□□□ -0.36
CPNE1-227ENST00000498056 DAPP1Q9UN19 280 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms