RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 KCNC1P48547 511 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 ALDH18A1P54886 795 aaKnown RBP14.43□□□□□ -0.1
NUP50-219ENST00000497960 RHAGQ02094 409 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 IRF8Q02556 426 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 HYAL2Q12891 473 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 LAPTM5Q13571 262 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 SETDB1Q15047 1291 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 EXT1Q16394 746 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 HIST2H2ACQ16777 129 aaPredicted RBP14.43□□□□□ -0.1
NUP50-219ENST00000497960 BTBD16Q32M84 506 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 CCDC153Q494R4 210 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 SFT2D3Q587I9 215 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 B3GNTL1Q67FW5 361 aaPredicted RBP14.43□□□□□ -0.1
NUP50-219ENST00000497960 PLAG1Q6DJT9 500 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 HIST2H2AA3Q6FI13 130 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 SH2D5Q6ZV89 423 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 FAM26EQ8N5C1 309 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 GOLGA6L1Q8N7Z2 621 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 PTGR2Q8N8N7 351 aaPredicted RBP14.43□□□□□ -0.1
NUP50-219ENST00000497960 BANPQ8N9N5 519 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 GAL3ST3Q96A11 431 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 PTCD3Q96EY7 689 aaKnown RBP14.43□□□□□ -0.1
NUP50-219ENST00000497960 LPAR4Q99677 370 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 CD244Q9BZW8 370 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 ACBD3Q9H3P7 528 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 VIPAS39Q9H9C1 493 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 AGPAT4Q9NRZ5 378 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 ASF1BQ9NVP2 202 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 COPG2Q9UBF2 871 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 MID2Q9UJV3 735 aa14.43□□□□□ -0.1
NUP50-219ENST00000497960 SCN2AQ99250 2005 aa14.42□□□□□ -0.1
NUP50-219ENST00000497960 A8MT66 165 aa14.42□□□□□ -0.1
NUP50-219ENST00000497960 TCP11X1B4DZS4 312 aa14.42□□□□□ -0.1
NUP50-219ENST00000497960 PRMT3O60678 531 aa14.42□□□□□ -0.1
NUP50-219ENST00000497960 DNAJB6O75190 326 aa14.42□□□□□ -0.1
NUP50-219ENST00000497960 CLEC3AO75596 197 aa14.42□□□□□ -0.1
NUP50-219ENST00000497960 SMIM10L1P0DMW3 83 aa14.42□□□□□ -0.1
NUP50-219ENST00000497960 MTHFD2P13995 350 aa14.42□□□□□ -0.1
NUP50-219ENST00000497960 TSFMP43897 325 aaKnown RBP14.42□□□□□ -0.1
NUP50-219ENST00000497960 OR4D2P58180 307 aa14.42□□□□□ -0.1
NUP50-219ENST00000497960 BTN3A2P78410 334 aa14.42□□□□□ -0.1
NUP50-219ENST00000497960 DOC2AQ14183 400 aa14.42□□□□□ -0.1
NUP50-219ENST00000497960 ABHD17BQ5VST6 288 aa14.42□□□□□ -0.1
NUP50-219ENST00000497960 PAPD4Q6PIY7 484 aaKnown RBP14.42□□□□□ -0.1
NUP50-219ENST00000497960 TSLPQ969D9 159 aa14.42□□□□□ -0.1
NUP50-219ENST00000497960 PHF21BQ96EK2 531 aa14.42□□□□□ -0.1
NUP50-219ENST00000497960 WDR34Q96EX3 536 aa14.42□□□□□ -0.1
NUP50-219ENST00000497960 SMIM10Q96HG1 83 aa14.42□□□□□ -0.1
NUP50-219ENST00000497960 MAGEB10Q96LZ2 347 aaPredicted RBP14.42□□□□□ -0.1
NUP50-219ENST00000497960 PTCHD1Q96NR3 888 aa14.42□□□□□ -0.1
NUP50-219ENST00000497960 RHBGQ9H310 441 aa14.42□□□□□ -0.1
NUP50-219ENST00000497960 TMBIM4Q9HC24 238 aa14.42□□□□□ -0.1
NUP50-219ENST00000497960 PLA2G3Q9NZ20 509 aa14.42□□□□□ -0.1
NUP50-219ENST00000497960 OPTCQ9UBM4 332 aa14.42□□□□□ -0.1
NUP50-219ENST00000497960 EMCNQ9ULC0 261 aa14.42□□□□□ -0.1
NUP50-219ENST00000497960 ANGPTL3Q9Y5C1 460 aa14.42□□□□□ -0.1
NUP50-219ENST00000497960 PTPN13Q12923 2485 aa14.42□□□□□ -0.1
NUP50-219ENST00000497960 SVILO95425 2214 aa14.42□□□□□ -0.1
NUP50-219ENST00000497960 ASH1LQ9NR48 2969 aaKnown RBP14.41□□□□□ -0.1
NUP50-219ENST00000497960 TRAV17A0A0B4J275 112 aa14.41□□□□□ -0.1
NUP50-219ENST00000497960 LRIT2A6NDA9 550 aa14.41□□□□□ -0.1
NUP50-219ENST00000497960 A8MUI8 341 aa14.41□□□□□ -0.1
NUP50-219ENST00000497960 ERI3O43414 337 aaKnown RBP14.41□□□□□ -0.1
NUP50-219ENST00000497960 KLK8O60259 260 aa14.41□□□□□ -0.1
NUP50-219ENST00000497960 PLIN3O60664 434 aa14.41□□□□□ -0.1
NUP50-219ENST00000497960 PROCP04070 461 aa14.41□□□□□ -0.1
NUP50-219ENST00000497960 MYL2P10916 166 aa14.41□□□□□ -0.1
NUP50-219ENST00000497960 EEF1DP29692 281 aaKnown RBP14.41□□□□□ -0.1
NUP50-219ENST00000497960 TGM3Q08188 693 aa14.41□□□□□ -0.1
NUP50-219ENST00000497960 CHIT1Q13231 466 aa14.41□□□□□ -0.1
NUP50-219ENST00000497960 TBCCQ15814 346 aa14.41□□□□□ -0.1
NUP50-219ENST00000497960 FHL5Q5TD97 284 aa14.41□□□□□ -0.1
NUP50-219ENST00000497960 TRIM40Q6P9F5 258 aa14.41□□□□□ -0.1
NUP50-219ENST00000497960 QSOX2Q6ZRP7 698 aa14.41□□□□□ -0.1
NUP50-219ENST00000497960 EXOC3L1Q86VI1 746 aa14.41□□□□□ -0.1
NUP50-219ENST00000497960 CATSPER1Q8NEC5 780 aa14.41□□□□□ -0.1
NUP50-219ENST00000497960 ARMC2Q8NEN0 867 aa14.41□□□□□ -0.1
NUP50-219ENST00000497960 OR1N1Q8NGS0 311 aa14.41□□□□□ -0.1
NUP50-219ENST00000497960 M1APQ8TC57 530 aa14.41□□□□□ -0.1
NUP50-219ENST00000497960 HAS2Q92819 552 aa14.41□□□□□ -0.1
NUP50-219ENST00000497960 UBE2E3Q969T4 207 aa14.41□□□□□ -0.1
NUP50-219ENST00000497960 MS4A6EQ96DS6 147 aa14.41□□□□□ -0.1
NUP50-219ENST00000497960 REXO4Q9GZR2 422 aaKnown RBP14.41□□□□□ -0.1
NUP50-219ENST00000497960 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.41□□□□□ -0.19e-7■■■■□ 25.2
NUP50-219ENST00000497960 C12orf65Q9H3J6 166 aaKnown RBP14.41□□□□□ -0.1
NUP50-219ENST00000497960 KCNK13Q9HB14 408 aa14.41□□□□□ -0.1
NUP50-219ENST00000497960 STMN3Q9NZ72 180 aa14.41□□□□□ -0.1
NUP50-219ENST00000497960 ASB1Q9Y576 335 aa14.41□□□□□ -0.1
NUP50-219ENST00000497960 TNPO3Q9Y5L0 923 aaKnown RBP14.41□□□□□ -0.1
NUP50-219ENST00000497960 ACTL7BQ9Y614 415 aa14.41□□□□□ -0.1
NUP50-219ENST00000497960 HECTD1Q9ULT8 2610 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 CLEC18AA5D8T8 446 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 STX16-NPEPL1H3BU86 382 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 K7EPI3 171 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 STX16O14662 325 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 B3GALT2O43825 422 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 PRAMEF4O60810 478 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 WDPCPO95876 746 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 SBK3P0C264 359 aa14.4□□□□□ -0.1
NUP50-219ENST00000497960 CREB1P16220 341 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms