RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	NKAPL	Q5M9Q1	402 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ZNF678	Q5SXM1	525 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PAQR7	Q86WK9	346 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ZNF567	Q8N184	647 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ARFGAP1	Q8N6T3	406 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TMEM145	Q8NBT3	493 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ZNF671	Q8TAW3	534 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TRMT10A	Q8TBZ6	339 aa	Known RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	NELL2	Q99435	816 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MYOC	Q99972	504 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TBL1Y	Q9BQ87	522 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	NT5C1A	Q9BXI3	368 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TEX10	Q9NXF1	929 aa	Predicted RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SH3BP4	Q9P0V3	963 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CDV3	Q9UKY7	258 aa	Known RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	DNAJC15	Q9Y5T4	150 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	BRWD3	Q6RI45	1802 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	DBX1	A6NMT0	343 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ZNF705E	A8MWA4	302 aa	Predicted RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	NARS	O43776	548 aa	Known RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	RAD1	O60671	282 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	EIF3G	O75821	320 aa	Known RBP eCLIP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	RAB3D	O95716	219 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ZNF35	P13682	527 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CYP2B6	P20813	491 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PAX6	P26367	422 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MAGEA12	P43365	314 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	XK	P51811	444 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ALKBH1	Q13686	389 aa	Known RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TECRL	Q5HYJ1	363 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	NCEH1	Q6PIU2	408 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ZNF852	Q6ZMS4	543 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CXXC5	Q7LFL8	322 aa	Known RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	KRT77	Q7Z794	578 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TMEM135	Q86UB9	458 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	C4orf19	Q8IY42	314 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ARRDC4	Q8NCT1	418 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	OR10Q1	Q8NGQ4	319 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ACOT12	Q8WYK0	555 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CPNE4	Q96A23	557 aa	Predicted RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	UBXN10	Q96LJ8	280 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CNTNAP3B	Q96NU0	1288 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	APOBEC3G	Q9HC16	384 aa	Known RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	RAD18	Q9NS91	495 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	VSX1	Q9NZR4	365 aa	Predicted RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	RUVBL1	Q9Y265	456 aa	Known RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MED16	Q9Y2X0	877 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MARF1	Q9Y4F3	1742 aa	Known RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TMEM82	A0PJX8	343 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ZNF729	A6NN14	1252 aa	Predicted RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SPATA31C2	B4DYI2	1134 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	FXYD1	O00168	92 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	RFXANK	O14593	260 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CREBL2	O60519	120 aa	Predicted RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ALDH1A1	P00352	501 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	IFNA17	P01571	189 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	HLA-DPB1	P04440	258 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	NR2C1	P13056	603 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	HOXD8	P13378	290 aa	Predicted RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	LCP1	P13796	627 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PRF1	P14222	555 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GGT2	P36268	569 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	KCNJ3	P48549	501 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SNTB2	Q13425	540 aa	Known RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GOLGA7B	Q2TAP0	167 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	FAM174B	Q3ZCQ3	159 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	OR2B11	Q5JQS5	317 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TEX30	Q5JUR7	227 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	HECTD2	Q5U5R9	776 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	HACD4	Q5VWC8	232 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SLC22A10	Q63ZE4	541 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	LAMTOR1	Q6IAA8	161 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MARCH9	Q86YJ5	346 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	DAW1	Q8N136	415 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	WDR20	Q8TBZ3	569 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	NXPE3	Q969Y0	559 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ZC3HAV1L	Q96H79	300 aa	Known RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TEPSIN	Q96N21	525 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MAPKAP1	Q9BPZ7	522 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TMEM43	Q9BTV4	400 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TMPRSS5	Q9H3S3	457 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PIGM	Q9H3S5	423 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CNOT2	Q9NZN8	540 aa	Known RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549		A0A1B0GV90	55 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	OR6C74	A6NCV1	312 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	OR2AT4	A6NND4	320 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	MCIDAS	D6RGH6	385 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549		M0R082	166 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PPP1R11	O60927	126 aa	Predicted RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	PRKAR2A	P13861	404 aa	Known RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TYR	P14679	529 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	GOT1	P17174	413 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	CD68	P34810	354 aa	Predicted RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	FAU	P35544	74 aa	Known RBP	7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SOX3	P41225	446 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	ASMT	P46597	345 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	AVPR1B	P47901	424 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SLC6A3	Q01959	620 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	TAZ	Q16635	292 aa		7.88	□□□□□ -1.15
CRNKL1-205	ENST00000496549	SUPT20HL1	Q3ZLR7	823 aa		7.88	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms