RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 RAB38P57729 211 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 TAS2R50P59544 299 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 PCDH1Q08174 1060 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 TGM3Q08188 693 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 TUBA3CQ13748 450 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 E2F2Q14209 437 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 SETDB1Q15047 1291 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 INAQ16352 499 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 MED27Q6P2C8 311 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 TUBA3EQ6PEY2 450 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 KIF2BQ8N4N8 673 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 TEX9Q8N6V9 391 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 TMEM52Q8NDY8 209 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 NFAM1Q8NET5 270 aaPredicted RBP11.09□□□□□ -0.63
THBS3-208ENST00000496332 KIF18AQ8NI77 898 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 ELP5Q8TE02 316 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 SLC44A1Q8WWI5 657 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 UBE2E3Q969T4 207 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 GPR78Q96P69 363 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 SERINC2Q96SA4 455 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 SLX1AQ9BQ83 275 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 UTP23Q9BRU9 249 aaKnown RBP11.09□□□□□ -0.63
THBS3-208ENST00000496332 COPS7BQ9H9Q2 264 aaPredicted RBP11.09□□□□□ -0.63
THBS3-208ENST00000496332 PRDM7Q9NQW5 492 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 PRTFDC1Q9NRG1 225 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 OLAHQ9NV23 265 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 ANKRD10Q9NXR5 420 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 ABI3Q9P2A4 366 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 MMACHCQ9Y4U1 282 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 ANGPTL3Q9Y5C1 460 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 DOPEY2Q9Y3R5 2298 aa11.09□□□□□ -0.63
THBS3-208ENST00000496332 CLDN4O14493 209 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 SH3BGRLO75368 114 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 RASAL1O95294 804 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 INHBAP08476 426 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 CD96P40200 585 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 HNRNPFP52597 415 aaKnown RBP11.08□□□□□ -0.64
THBS3-208ENST00000496332 ALDH18A1P54886 795 aaKnown RBP11.08□□□□□ -0.64
THBS3-208ENST00000496332 LIM2P55344 173 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 HSD17B7P56937 341 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 SLC13A2Q13183 592 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 NAA30Q147X3 362 aaPredicted RBP11.08□□□□□ -0.64
THBS3-208ENST00000496332 PFKFB4Q16877 469 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 ZNF766Q5HY98 468 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 ZNF324BQ6AW86 544 aaPredicted RBP11.08□□□□□ -0.64
THBS3-208ENST00000496332 KLC3Q6P597 504 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 UBE3DQ7Z6J8 389 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 RPS19BP1Q86WX3 136 aaKnown RBP11.08□□□□□ -0.64
THBS3-208ENST00000496332 SCUBE1Q8IWY4 988 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 LAS2Q8IYD9 372 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 PLD6Q8N2A8 252 aaKnown RBP11.08□□□□□ -0.64
THBS3-208ENST00000496332 FAM47BQ8NA70 645 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 OR7G3Q8NG95 312 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 UHMK1Q8TAS1 419 aaKnown RBP11.08□□□□□ -0.64
THBS3-208ENST00000496332 ADAMTS18Q8TE60 1221 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 ZNF473Q8WTR7 871 aaKnown RBP11.08□□□□□ -0.64
THBS3-208ENST00000496332 SIGLEC12Q96PQ1 595 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 KCNC2Q96PR1 638 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 PAFAH2Q99487 392 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 MS4A8Q9BY19 250 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 CDCP1Q9H5V8 836 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 CPSF2Q9P2I0 782 aaKnown RBP11.08□□□□□ -0.64
THBS3-208ENST00000496332 ERRFI1Q9UJM3 462 aaPredicted RBP11.08□□□□□ -0.64
THBS3-208ENST00000496332 DAPP1Q9UN19 280 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 OSGIN2Q9Y236 505 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 SLC5A6Q9Y289 635 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 MRPS33Q9Y291 106 aaKnown RBP11.08□□□□□ -0.64
THBS3-208ENST00000496332 IKBKGQ9Y6K9 419 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 CNTRLQ7Z7A1 2325 aa11.08□□□□□ -0.64
THBS3-208ENST00000496332 LRRC14BA6NHZ5 514 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 GABRR3A8MPY1 467 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 POC1B-GALNT4F8VUJ3 575 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 TGFBR3LH3BV60 316 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 RTCAO00442 366 aaKnown RBP11.07□□□□□ -0.64
THBS3-208ENST00000496332 CYR61O00622 381 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 KLK8O60259 260 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 MYO1DO94832 1006 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 DDAH2O95865 285 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 TGFB1P01137 390 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 CRYABP02511 175 aaKnown RBP11.07□□□□□ -0.64
THBS3-208ENST00000496332 PPP2R1BP30154 601 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 SERPINB1P30740 379 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 SERPINB9P50453 376 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 OC90Q02509 493 aaPredicted RBP11.07□□□□□ -0.64
THBS3-208ENST00000496332 SRSF11Q05519 484 aaKnown RBP11.07□□□□□ -0.64
THBS3-208ENST00000496332 RCN2Q14257 317 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 ESPL1Q14674 2120 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 PCBP2Q15366 365 aaKnown RBP eCLIP11.07□□□□□ -0.64
THBS3-208ENST00000496332 OR1C1Q15619 314 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 TMEM35AQ53FP2 167 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 SPINK14Q6IE38 97 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 GRHL2Q6ISB3 625 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 ZNF793Q6ZN11 406 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 CHSY3Q70JA7 882 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 TAOK1Q7L7X3 1001 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 CLNKQ7Z7G1 428 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 MYLK4Q86YV6 388 aaPredicted RBP11.07□□□□□ -0.64
THBS3-208ENST00000496332 ZNF595Q8IYB9 648 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 LGI4Q8N135 537 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 CEP112Q8N8E3 955 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms