RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 LGR4Q9BXB1 951 aa10.58□□□□□ -0.72
CMSS1-208ENST00000496116 NEUROD4Q9HD90 331 aa10.58□□□□□ -0.72
CMSS1-208ENST00000496116 ZDHHC4Q9NPG8 344 aa10.58□□□□□ -0.72
CMSS1-208ENST00000496116 TAAR2Q9P1P5 351 aa10.58□□□□□ -0.72
CMSS1-208ENST00000496116 ERVK-18Q9QC07 812 aa10.58□□□□□ -0.72
CMSS1-208ENST00000496116 ACSL5Q9ULC5 683 aa10.58□□□□□ -0.72
CMSS1-208ENST00000496116 FAM32AQ9Y421 112 aaKnown RBP10.58□□□□□ -0.72
CMSS1-208ENST00000496116 TRPM6Q9BX84 2022 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 NUMA1Q14980 2115 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 A0A0J9YVX5 310 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 A8MVJ9 347 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 MID1O15344 667 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 CAPN5O15484 640 aaPredicted RBP10.57□□□□□ -0.72
CMSS1-208ENST00000496116 TBX19O60806 448 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 DRD3P35462 400 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 GALK1P51570 392 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 DSTNP60981 165 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 EEF1A2Q05639 463 aaKnown RBP10.57□□□□□ -0.72
CMSS1-208ENST00000496116 WSCD2Q2TBF2 565 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.57□□□□□ -0.72
CMSS1-208ENST00000496116 PRSS48Q7RTY5 328 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 FAM124AQ86V42 546 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 ARMC8Q8IUR7 673 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 YAF2Q8IY57 180 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 ABHD11Q8NFV4 315 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 FAM81AQ8TBF8 368 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 CSF3RQ99062 836 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 SORBS1Q9BX66 1292 aaKnown RBP10.57□□□□□ -0.72
CMSS1-208ENST00000496116 MS4A8Q9BY19 250 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 WDR26Q9H7D7 661 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 NT5DC2Q9H857 520 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 RASSF1Q9NS23 344 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 POFUT2Q9Y2G5 429 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 PCDHGA10Q9Y5H3 936 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 SNX8Q9Y5X2 465 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 CFAP20Q9Y6A4 193 aaKnown RBP10.57□□□□□ -0.72
CMSS1-208ENST00000496116 SH3PXD2BA1X283 911 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 PDPK1O15530 556 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 BCAS1O75363 584 aaPredicted RBP10.57□□□□□ -0.72
CMSS1-208ENST00000496116 CLPXO76031 633 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 ADH1BP00325 375 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 FCARP24071 287 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 EPHA2P29317 976 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 OR1E2P47887 323 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 ST13P50502 369 aaKnown RBP10.57□□□□□ -0.72
CMSS1-208ENST00000496116 CLCNKAP51800 687 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 MANFP55145 182 aaKnown RBP10.57□□□□□ -0.72
CMSS1-208ENST00000496116 CDH12P55289 794 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 PCBP3P57721 371 aaKnown RBP10.57□□□□□ -0.72
CMSS1-208ENST00000496116 CYP4F2P78329 520 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 REEP5Q00765 189 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 AGERQ15109 404 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 CST6Q15828 149 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 MICAQ29983 383 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 AGBL4Q5VU57 503 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 EGFLAMQ63HQ2 1017 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 TANGO2Q6ICL3 276 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 GPR153Q6NV75 609 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 KLHL35Q6PF15 583 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 VITQ6UXI7 678 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 NUDT13Q86X67 352 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 C7orf61Q8IZ16 206 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 ANKRD53Q8N9V6 530 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 FNDC8Q8TC99 324 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 OR5P2Q8WZ92 322 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 FEVQ99581 238 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 TEX101Q9BY14 249 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 ZNF556Q9HAH1 456 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 TM7SF3Q9NS93 570 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 CUEDC1Q9NWM3 386 aaPredicted RBP10.57□□□□□ -0.72
CMSS1-208ENST00000496116 ENOPH1Q9UHY7 261 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 PCDHGA6Q9Y5G7 932 aa10.57□□□□□ -0.72
CMSS1-208ENST00000496116 C5orf58C9J3I9 102 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 E9PQ18 207 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 H7BY64 318 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 SLC22A1O15245 554 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 PCDHGA12O60330 932 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 FOXD2O60548 495 aaPredicted RBP10.56□□□□□ -0.72
CMSS1-208ENST00000496116 APODP05090 189 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 TNFRSF1BP20333 461 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 TEAD1P28347 426 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 BSGP35613 385 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 KRT20P35900 424 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 PXNP49023 591 aaPredicted RBP10.56□□□□□ -0.72
CMSS1-208ENST00000496116 ALDH9A1P49189 494 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 C21orf59P57076 290 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 TAS2R38P59533 333 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 TMED1Q13445 227 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 SYT6Q5T7P8 510 aaPredicted RBP10.56□□□□□ -0.72
CMSS1-208ENST00000496116 REEP3Q6NUK4 255 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 CEACAM20Q6UY09 585 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 CCDC81Q6ZN84 652 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 SLC16A12Q6ZSM3 486 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 TSEN54Q7Z6J9 526 aaKnown RBP10.56□□□□□ -0.72
CMSS1-208ENST00000496116 CACUL1Q86Y37 369 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 ENTHD1Q8IYW4 607 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 LGI4Q8N135 537 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 OR4C15Q8NGM1 316 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 OR52J3Q8NH60 311 aa10.56□□□□□ -0.72
CMSS1-208ENST00000496116 TM4SF18Q96CE8 201 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms