RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 ZNF764Q96H86 408 aaPredicted RBP6.62□□□□□ -1.35
USP39-219ENST00000496047 MSLNLQ96KJ4 702 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 EGLN2Q96KS0 407 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 HHIPQ96QV1 700 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 INSM2Q96T92 566 aaPredicted RBP6.62□□□□□ -1.35
USP39-219ENST00000496047 TSC22D3Q99576 134 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 SLC35A5Q9BS91 424 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 INPP5KQ9BT40 448 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 LGR4Q9BXB1 951 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 MS4A8Q9BY19 250 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 ROGDIQ9GZN7 287 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 ING2Q9H160 280 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 OR51B5Q9H339 312 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 CAAP1Q9H8G2 361 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 TRIM45Q9H8W5 580 aaPredicted RBP6.62□□□□□ -1.35
USP39-219ENST00000496047 CLK4Q9HAZ1 481 aaKnown RBP6.62□□□□□ -1.35
USP39-219ENST00000496047 CACYBPQ9HB71 228 aaKnown RBP6.62□□□□□ -1.35
USP39-219ENST00000496047 SERHLQ9NQF3 203 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 AASDHPPTQ9NRN7 309 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 TUBA8Q9NY65 449 aaPredicted RBP6.62□□□□□ -1.35
USP39-219ENST00000496047 TAS2R9Q9NYW1 312 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 ANKMY1Q9P2S6 941 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 GULP1Q9UBP9 304 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 SERGEFQ9UGK8 458 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 ENOPH1Q9UHY7 261 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 MMP17Q9ULZ9 603 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 SNX7Q9UNH6 387 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 DMTF1Q9Y222 760 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 ENTPD4Q9Y227 616 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 HRH3Q9Y5N1 445 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 GMEB1Q9Y692 573 aa6.62□□□□□ -1.35
USP39-219ENST00000496047 CFAP20Q9Y6A4 193 aaKnown RBP6.62□□□□□ -1.35
USP39-219ENST00000496047 CACNA1BQ00975 2339 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 FAM149AA5PLN7 773 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 FAM221BA6H8Z2 402 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 OR5K4A6NMS3 321 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 GABRR3A8MPY1 467 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 ISM1B1AKI9 464 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 SAP18O00422 153 aaKnown RBP6.61□□□□□ -1.35
USP39-219ENST00000496047 ADAMDEC1O15204 470 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 SUV39H1O43463 412 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 NOBOXO60393 691 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 PRKD3O94806 890 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 RASGRP1O95267 797 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 H6PDO95479 791 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 ETHE1O95571 254 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 SEMA4FO95754 770 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 TNFP01375 233 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 SERPIND1P05546 499 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 CEACAM5P06731 702 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 KLK1P06870 262 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 IL3P08700 152 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 LAMP1P11279 417 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 DRD2P14416 443 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 HOXB9P17482 250 aaPredicted RBP6.61□□□□□ -1.35
USP39-219ENST00000496047 CKMT2P17540 419 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 DDCP20711 480 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 PPP2R1BP30154 601 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 KDELR2P33947 212 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 TTKP33981 857 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 ACTR1BP42025 376 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 CDKN2CP42773 168 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 MAGEA8P43361 318 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 ALDH9A1P49189 494 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 BLKP51451 505 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 ARSFP54793 590 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 MANFP55145 182 aaKnown RBP6.61□□□□□ -1.35
USP39-219ENST00000496047 ACTR1AP61163 376 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 RPS15AP62244 130 aaKnown RBP6.61□□□□□ -1.35
USP39-219ENST00000496047 TUBA4AP68366 448 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 CYP4F2P78329 520 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 MEF2AQ02078 507 aaPredicted RBP6.61□□□□□ -1.35
USP39-219ENST00000496047 TOP3AQ13472 1001 aaPredicted RBP6.61□□□□□ -1.35
USP39-219ENST00000496047 IL18R1Q13478 541 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 GNA13Q14344 377 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 SLC9A5Q14940 896 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 RGNQ15493 299 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 SLC36A3Q495N2 470 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 SPDYE7PQ495Y7 208 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 KCTD21Q4G0X4 260 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 LIN52Q52LA3 116 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 OTUD3Q5T2D3 398 aaPredicted RBP6.61□□□□□ -1.35
USP39-219ENST00000496047 OR2T5Q6IEZ7 315 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 FAM71E1Q6IPT2 247 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 KIAA1211LQ6NV74 962 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 DUS1LQ6P1R4 473 aaKnown RBP6.61□□□□□ -1.35
USP39-219ENST00000496047 SPESP1Q6UW49 350 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 CBLL1Q75N03 491 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 PATL1Q86TB9 770 aaKnown RBP6.61□□□□□ -1.35
USP39-219ENST00000496047 FAM124AQ86V42 546 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 OOSP2Q86WS3 158 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 CARM1Q86X55 608 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 MSRB3Q8IXL7 192 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 ZZZ3Q8IYH5 903 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 CLECL1Q8IZS7 167 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 C8orf59Q8N0T1 100 aaPredicted RBP6.61□□□□□ -1.35
USP39-219ENST00000496047 FAM47BQ8NA70 645 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 KDF1Q8NAX2 398 aaPredicted RBP6.61□□□□□ -1.35
USP39-219ENST00000496047 TSPAN14Q8NG11 270 aa6.61□□□□□ -1.35
USP39-219ENST00000496047 OR52E1Q8NGJ3 308 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms