RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 TMEM120BA0PK00 339 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 SOCS6O14544 535 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 B4GALT2O60909 372 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 ZWINTO95229 277 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 KRT6AP02538 564 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 KRT6BP04259 564 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 ENO1P06733 434 aaKnown RBP18.33■□□□□ 0.52
HDAC4-212ENST00000495497 CHRNGP07510 517 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 FHP07954 510 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 DHRS4L1P0CG22 281 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 CHN1P15882 459 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 MMP11P24347 488 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 ARRB2P32121 409 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 KRT6CP48668 564 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 CUL3Q13618 768 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 ABRAXAS2Q15018 415 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 CPZQ66K79 652 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 CLEC6AQ6EIG7 209 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 MRGPREQ86SM8 312 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 CUZD1Q86UP6 607 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 ACOT4Q8N9L9 421 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 SRFBP1Q8NEF9 429 aaKnown RBP18.33■□□□□ 0.52
HDAC4-212ENST00000495497 MGARPQ8TDB4 240 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 TBC1D20Q96BZ9 403 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 C8orf44Q96CB5 159 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 SERPINI1Q99574 410 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 MAPKAP1Q9BPZ7 522 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 ZNF717Q9BY31 904 aaPredicted RBP18.33■□□□□ 0.52
HDAC4-212ENST00000495497 VIPAS39Q9H9C1 493 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 SEMA3GQ9NS98 782 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 PSD3Q9NYI0 1048 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 SLC12A4Q9UP95 1085 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 HS3ST3B1Q9Y662 390 aa18.33■□□□□ 0.52
HDAC4-212ENST00000495497 A0A088AWK7 358 aa18.32■□□□□ 0.52
HDAC4-212ENST00000495497 NPHS1O60500 1241 aa18.32■□□□□ 0.52
HDAC4-212ENST00000495497 ALOX12BO75342 701 aa18.32■□□□□ 0.52
HDAC4-212ENST00000495497 ULK1O75385 1050 aa18.32■□□□□ 0.52
HDAC4-212ENST00000495497 EEDO75530 441 aaKnown RBP18.32■□□□□ 0.52
HDAC4-212ENST00000495497 RNH1P13489 461 aaKnown RBP18.32■□□□□ 0.52
HDAC4-212ENST00000495497 ZNF10P21506 573 aaPredicted RBP18.32■□□□□ 0.52
HDAC4-212ENST00000495497 HIST1H1TP22492 207 aaPredicted RBP18.32■□□□□ 0.52
HDAC4-212ENST00000495497 BSGP35613 385 aa18.32■□□□□ 0.52
HDAC4-212ENST00000495497 LIM2P55344 173 aa18.32■□□□□ 0.52
HDAC4-212ENST00000495497 BTG2P78543 158 aa18.32■□□□□ 0.52
HDAC4-212ENST00000495497 LINC00303Q3SY05 128 aa18.32■□□□□ 0.52
HDAC4-212ENST00000495497 ARL13AQ5H913 290 aaPredicted RBP18.32■□□□□ 0.52
HDAC4-212ENST00000495497 AMER2Q8N7J2 671 aa18.32■□□□□ 0.52
HDAC4-212ENST00000495497 FAM47BQ8NA70 645 aa18.32■□□□□ 0.52
HDAC4-212ENST00000495497 TMEM52Q8NDY8 209 aa18.32■□□□□ 0.52
HDAC4-212ENST00000495497 THAP4Q8WY91 577 aa18.32■□□□□ 0.52
HDAC4-212ENST00000495497 TTC9Q92623 222 aa18.32■□□□□ 0.52
HDAC4-212ENST00000495497 CATSPER2Q96P56 530 aa18.32■□□□□ 0.52
HDAC4-212ENST00000495497 CSF3RQ99062 836 aa18.32■□□□□ 0.52
HDAC4-212ENST00000495497 CENPKQ9BS16 269 aa18.32■□□□□ 0.52
HDAC4-212ENST00000495497 NPLQ9BXD5 320 aaPredicted RBP18.32■□□□□ 0.52
HDAC4-212ENST00000495497 MRPL1Q9BYD6 325 aaKnown RBP18.32■□□□□ 0.52
HDAC4-212ENST00000495497 CLK4Q9HAZ1 481 aaKnown RBP18.32■□□□□ 0.52
HDAC4-212ENST00000495497 P4HTMQ9NXG6 502 aa18.32■□□□□ 0.52
HDAC4-212ENST00000495497 FBXW2Q9UKT8 454 aa18.32■□□□□ 0.52
HDAC4-212ENST00000495497 PPT2Q9UMR5 302 aa18.32■□□□□ 0.52
HDAC4-212ENST00000495497 FIS1Q9Y3D6 152 aa18.32■□□□□ 0.52
HDAC4-212ENST00000495497 KCNMB2Q9Y691 235 aa18.32■□□□□ 0.52
HDAC4-212ENST00000495497 CACNA1BQ00975 2339 aa18.32■□□□□ 0.52
HDAC4-212ENST00000495497 MGAQ8IWI9 3026 aa18.31■□□□□ 0.52
HDAC4-212ENST00000495497 PSMD12O00232 456 aaPredicted RBP18.31■□□□□ 0.52
HDAC4-212ENST00000495497 CRCPO75575 148 aa18.31■□□□□ 0.52
HDAC4-212ENST00000495497 DNAJB5O75953 348 aa18.31■□□□□ 0.52
HDAC4-212ENST00000495497 IGHEP01854 428 aa18.31■□□□□ 0.52
HDAC4-212ENST00000495497 GBAP04062 536 aa18.31■□□□□ 0.52
HDAC4-212ENST00000495497 HNRNPFP52597 415 aaKnown RBP18.31■□□□□ 0.52
HDAC4-212ENST00000495497 WDR4P57081 412 aaKnown RBP18.31■□□□□ 0.52
HDAC4-212ENST00000495497 RAB38P57729 211 aa18.31■□□□□ 0.52
HDAC4-212ENST00000495497 RHAGQ02094 409 aa18.31■□□□□ 0.52
HDAC4-212ENST00000495497 EEF1A2Q05639 463 aaKnown RBP18.31■□□□□ 0.52
HDAC4-212ENST00000495497 SLAMF1Q13291 335 aa18.31■□□□□ 0.52
HDAC4-212ENST00000495497 RCN2Q14257 317 aa18.31■□□□□ 0.52
HDAC4-212ENST00000495497 CHI3L2Q15782 390 aa18.31■□□□□ 0.52
HDAC4-212ENST00000495497 HHATQ5VTY9 493 aa18.31■□□□□ 0.52
HDAC4-212ENST00000495497 BORAQ6PGQ7 559 aa18.31■□□□□ 0.52
HDAC4-212ENST00000495497 KIRREL2Q6UWL6 708 aa18.31■□□□□ 0.52
HDAC4-212ENST00000495497 LANCL3Q6ZV70 420 aa18.31■□□□□ 0.52
HDAC4-212ENST00000495497 OR6Y1Q8NGX8 325 aa18.31■□□□□ 0.52
HDAC4-212ENST00000495497 PPP1R14CQ8TAE6 165 aa18.31■□□□□ 0.52
HDAC4-212ENST00000495497 SREK1Q8WXA9 508 aaKnown RBP18.31■□□□□ 0.52
HDAC4-212ENST00000495497 TSLPQ969D9 159 aa18.31■□□□□ 0.52
HDAC4-212ENST00000495497 ATP6V1G3Q96LB4 118 aa18.31■□□□□ 0.52
HDAC4-212ENST00000495497 OR1F2PQ96R84 312 aa18.31■□□□□ 0.52
HDAC4-212ENST00000495497 SH3GL2Q99962 352 aa18.31■□□□□ 0.52
HDAC4-212ENST00000495497 ROGDIQ9GZN7 287 aa18.31■□□□□ 0.52
HDAC4-212ENST00000495497 ZNF446Q9NWS9 450 aa18.31■□□□□ 0.52
HDAC4-212ENST00000495497 KCMF1Q9P0J7 381 aa18.31■□□□□ 0.52
HDAC4-212ENST00000495497 DAPP1Q9UN19 280 aa18.31■□□□□ 0.52
HDAC4-212ENST00000495497 KMT2BQ9UMN6 2715 aaPredicted RBP18.31■□□□□ 0.52
HDAC4-212ENST00000495497 TMEM233B4DJY2 109 aa18.3■□□□□ 0.52
HDAC4-212ENST00000495497 BIRC5O15392 142 aa18.3■□□□□ 0.52
HDAC4-212ENST00000495497 ITM2AO43736 263 aa18.3■□□□□ 0.52
HDAC4-212ENST00000495497 LYPLA1O75608 230 aaPredicted RBP18.3■□□□□ 0.52
HDAC4-212ENST00000495497 SCELO95171 688 aa18.3■□□□□ 0.52
HDAC4-212ENST00000495497 BGNP21810 368 aa18.3■□□□□ 0.52
HDAC4-212ENST00000495497 HMGCS1Q01581 520 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms