RNA–Protein interactions for RNA: ENST00000494683.1

DENND4B-212, Transcript of DENN domain containing 4B, humanhuman

TSL 3

Gene DENND4B, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-212ENST00000494683 CLDN16Q9Y5I7 305 aa12.97□□□□□ -0.33
DENND4B-212ENST00000494683 TCP11X1B4DZS4 312 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 TGFBR3LH3BV60 316 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 B3GALT2O43825 422 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 PRMT3O60678 531 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 SCELO95171 688 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 UQCRHP07919 91 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 SNRPAP09012 282 aaKnown RBP12.96□□□□□ -0.33
DENND4B-212ENST00000494683 RBP1P09455 135 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 SBK3P0C264 359 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 PCNAP12004 261 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 COL6A2P12110 1019 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 SERPINB1P30740 379 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 TNFSF10P50591 281 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 MTTPP55157 894 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 LIM2P55344 173 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 ZNF33BQ06732 778 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 SRSF1Q07955 248 aaKnown RBP eCLIP12.96□□□□□ -0.33
DENND4B-212ENST00000494683 GTF2H2Q13888 395 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 LIPJQ5W064 366 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 H3F3CQ6NXT2 135 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 GTF2H2CQ6P1K8 395 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 METTL2BQ6P1Q9 378 aaKnown RBP12.96□□□□□ -0.33
DENND4B-212ENST00000494683 ADGRD1Q6QNK2 874 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 RNF175Q8N4F7 328 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 FAM47BQ8NA70 645 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 KCNC2Q96PR1 638 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 BARD1Q99728 777 aaKnown RBP12.96□□□□□ -0.33
DENND4B-212ENST00000494683 NPAS2Q99743 824 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 SLC29A3Q9BZD2 475 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 ACTR8Q9H981 624 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 COPS7BQ9H9Q2 264 aaPredicted RBP12.96□□□□□ -0.33
DENND4B-212ENST00000494683 PLA2G3Q9NZ20 509 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 MAP10Q9P2G4 905 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 DAPP1Q9UN19 280 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 TSC22D4Q9Y3Q8 395 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 ANGPTL3Q9Y5C1 460 aa12.96□□□□□ -0.33
DENND4B-212ENST00000494683 TNPO3Q9Y5L0 923 aaKnown RBP12.96□□□□□ -0.33
DENND4B-212ENST00000494683 CNTRLQ7Z7A1 2325 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 DYTNA2CJ06 578 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 SAGE2PA6NJ88 616 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 STX16-NPEPL1H3BU86 382 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 RTCAO00442 366 aaKnown RBP12.95□□□□□ -0.34
DENND4B-212ENST00000494683 STX16O14662 325 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 UGDHO60701 494 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 WDPCPO95876 746 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 F10P00742 488 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 EEF1DP29692 281 aaKnown RBP12.95□□□□□ -0.34
DENND4B-212ENST00000494683 PIK3CGP48736 1102 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 VSNL1P62760 191 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 ACTN3Q08043 901 aaPredicted RBP12.95□□□□□ -0.34
DENND4B-212ENST00000494683 TGM3Q08188 693 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 SLC29A2Q14542 456 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 ABHD17BQ5VST6 288 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 KHDRBS2Q5VWX1 349 aaKnown RBP12.95□□□□□ -0.34
DENND4B-212ENST00000494683 WDR93Q6P2C0 686 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 TIFABQ6ZNK6 161 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 MYLK4Q86YV6 388 aaPredicted RBP12.95□□□□□ -0.34
DENND4B-212ENST00000494683 CRLF3Q8IUI8 442 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 HUS1BQ8NHY5 278 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 ELP5Q8TE02 316 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 HAS2Q92819 552 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 SCYL1Q96KG9 808 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 MAGEB10Q96LZ2 347 aaPredicted RBP12.95□□□□□ -0.34
DENND4B-212ENST00000494683 TBCDQ9BTW9 1192 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 MRPL46Q9H2W6 279 aaKnown RBP12.95□□□□□ -0.34
DENND4B-212ENST00000494683 IPPKQ9H8X2 491 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 KCNK13Q9HB14 408 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 DMRT3Q9NQL9 472 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 PRTFDC1Q9NRG1 225 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 FETUBQ9UGM5 382 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.95□□□□□ -0.34
DENND4B-212ENST00000494683 PCTPQ9UKL6 214 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 TMCO1Q9UM00 188 aa12.95□□□□□ -0.34
DENND4B-212ENST00000494683 COPG1Q9Y678 874 aaKnown RBP12.95□□□□□ -0.34
DENND4B-212ENST00000494683 V9GYY5 206 aaPredicted RBP12.95□□□□□ -0.34
DENND4B-212ENST00000494683 OR5H15A6NDH6 313 aa12.94□□□□□ -0.34
DENND4B-212ENST00000494683 A8MUI8 341 aa12.94□□□□□ -0.34
DENND4B-212ENST00000494683 H0YIV9 168 aa12.94□□□□□ -0.34
DENND4B-212ENST00000494683 CYR61O00622 381 aa12.94□□□□□ -0.34
DENND4B-212ENST00000494683 OR7A17O14581 309 aa12.94□□□□□ -0.34
DENND4B-212ENST00000494683 MAN1A2O60476 641 aa12.94□□□□□ -0.34
DENND4B-212ENST00000494683 SMIM24O75264 130 aa12.94□□□□□ -0.34
DENND4B-212ENST00000494683 SH3BGRLO75368 114 aa12.94□□□□□ -0.34
DENND4B-212ENST00000494683 TGFB1P01137 390 aa12.94□□□□□ -0.34
DENND4B-212ENST00000494683 RPS17P08708 135 aaKnown RBP12.94□□□□□ -0.34
DENND4B-212ENST00000494683 HIST1H1TP22492 207 aaPredicted RBP12.94□□□□□ -0.34
DENND4B-212ENST00000494683 ATP5A1P25705 553 aaKnown RBP12.94□□□□□ -0.34
DENND4B-212ENST00000494683 PIK3CBP42338 1070 aa12.94□□□□□ -0.34
DENND4B-212ENST00000494683 HSD17B7P56937 341 aa12.94□□□□□ -0.34
DENND4B-212ENST00000494683 TRAF3Q13114 568 aa12.94□□□□□ -0.34
DENND4B-212ENST00000494683 MRPL49Q13405 166 aaKnown RBP12.94□□□□□ -0.34
DENND4B-212ENST00000494683 DDX39BQ13838 428 aaKnown RBP12.94□□□□□ -0.34
DENND4B-212ENST00000494683 TMEM35AQ53FP2 167 aa12.94□□□□□ -0.34
DENND4B-212ENST00000494683 ACER2Q5QJU3 275 aa12.94□□□□□ -0.34
DENND4B-212ENST00000494683 FCRLBQ6BAA4 426 aa12.94□□□□□ -0.34
DENND4B-212ENST00000494683 RPUSD3Q6P087 351 aaKnown RBP12.94□□□□□ -0.34
DENND4B-212ENST00000494683 ZNF595Q8IYB9 648 aa12.94□□□□□ -0.34
DENND4B-212ENST00000494683 CNPY4Q8N129 248 aa12.94□□□□□ -0.34
DENND4B-212ENST00000494683 BEST3Q8N1M1 668 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms