RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 PALM2Q8IXS6 379 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 PPIL6Q8IXY8 311 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 SLC15A4Q8N697 577 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 ASCC1Q8N9N2 400 aaKnown RBP7.82□□□□□ -1.16
HDAC6-234ENST00000493923 OR52E1Q8NGJ3 308 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 OR5AR1Q8NGP9 310 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 OR13J1Q8NGT2 312 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 FLVCR1-AS1Q8TAF5 88 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 GABPB2Q8TAK5 448 aaPredicted RBP7.82□□□□□ -1.16
HDAC6-234ENST00000493923 PIWIL2Q8TC59 973 aaKnown RBP7.82□□□□□ -1.16
HDAC6-234ENST00000493923 DCAKDQ8WVC6 231 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 PEX13Q92968 403 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 VMP1Q96GC9 406 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 FAM111AQ96PZ2 611 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 FERD3LQ96RJ6 166 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 COPS8Q99627 209 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 COQ7Q99807 217 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 NPLQ9BXD5 320 aaPredicted RBP7.82□□□□□ -1.16
HDAC6-234ENST00000493923 TEX15Q9BXT5 2789 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 FAM60AQ9NP50 221 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 SPHK1Q9NYA1 384 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 SLC17A7Q9P2U7 560 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 ATPIF1Q9UII2 106 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 TUBD1Q9UJT1 453 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 PSME2Q9UL46 239 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 ACSL5Q9ULC5 683 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 ICKQ9UPZ9 632 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 BTRCQ9Y297 605 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 TESMINQ9Y4I5 508 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 PCDHGA6Q9Y5G7 932 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 ESPL1Q14674 2120 aa7.82□□□□□ -1.16
HDAC6-234ENST00000493923 GSAPA4D1B5 854 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 KRT87PA6NCN2 255 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 MROH6A6NGR9 719 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 TMEM150CB9EJG8 249 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 E7ESA3 106 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 H3BMH7 237 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 H7C0S8 307 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 SCRG1O75711 98 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 ATE1O95260 518 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 AP2A1O95782 977 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 SNRPAP09012 282 aaKnown RBP7.81□□□□□ -1.16
HDAC6-234ENST00000493923 ZSCAN5DPP0CG00 497 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 SFTPCP11686 197 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 PCNAP12004 261 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 COX4I1P13073 169 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 ITGALP20701 1170 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 ACADLP28330 430 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 PRDX3P30048 256 aaKnown RBP7.81□□□□□ -1.16
HDAC6-234ENST00000493923 RORAP35398 523 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 GRK3P35626 688 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 CASRP41180 1078 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 GABRA4P48169 554 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 MLLT10P55197 1068 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 P2RX3P56373 397 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 PHC1P78364 1004 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 HSD11B2P80365 405 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 TRAP1Q12931 704 aaKnown RBP7.81□□□□□ -1.16
HDAC6-234ENST00000493923 PRPSAP1Q14558 356 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 DEFB110Q30KQ9 67 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 PTCHD3Q3KNS1 767 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 CDONQ4KMG0 1287 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 RNASEH2BQ5TBB1 312 aaKnown RBP7.81□□□□□ -1.16
HDAC6-234ENST00000493923 FAM122CQ6P4D5 195 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 FAM198BQ6UWH4 519 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 ZNF517Q6ZMY9 492 aaPredicted RBP7.81□□□□□ -1.16
HDAC6-234ENST00000493923 CDHR3Q6ZTQ4 885 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 RFPL4BQ6ZWI9 263 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 USP43Q70EL4 1123 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 ZNF534Q76KX8 674 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 LDB1Q86U70 411 aaPredicted RBP7.81□□□□□ -1.16
HDAC6-234ENST00000493923 OOSP2Q86WS3 158 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 ARMC8Q8IUR7 673 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 VRK3Q8IV63 474 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 PGAM4Q8N0Y7 254 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 PARP8Q8N3A8 854 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 ANKFN1Q8N957 763 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 TMEM102Q8N9M5 508 aaPredicted RBP7.81□□□□□ -1.16
HDAC6-234ENST00000493923 FBXO27Q8NI29 283 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 ADAMTS17Q8TE56 1095 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 SLC44A1Q8WWI5 657 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 LCN9Q8WX39 176 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 MR1Q95460 341 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 TMIGD2Q96BF3 282 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 ULK4Q96C45 1275 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 CCDC124Q96CT7 223 aaKnown RBP7.81□□□□□ -1.16
HDAC6-234ENST00000493923 FAR2Q96K12 515 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 CD180Q99467 661 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 CCM2Q9BSQ5 444 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 LIN28AQ9H9Z2 209 aaKnown RBP7.81□□□□□ -1.16
HDAC6-234ENST00000493923 NEK6Q9HC98 313 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 XAB2Q9HCS7 855 aaKnown RBP7.81□□□□□ -1.16
HDAC6-234ENST00000493923 PDE7BQ9NP56 450 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 OLAHQ9NV23 265 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 SOHLH2Q9NX45 425 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 SYBUQ9NX95 663 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 TNFRSF10DQ9UBN6 386 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 POLHQ9Y253 713 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 KLHL20Q9Y2M5 609 aa7.81□□□□□ -1.16
HDAC6-234ENST00000493923 AAR2Q9Y312 384 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms