RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 ZNF750Q32MQ0 723 aa12.27□□□□□ -0.45
USF1-206ENST00000491629 UGT3A1Q6NUS8 523 aa12.27□□□□□ -0.45
USF1-206ENST00000491629 PAQR3Q6TCH7 311 aa12.27□□□□□ -0.45
USF1-206ENST00000491629 IL20RBQ6UXL0 311 aa12.27□□□□□ -0.45
USF1-206ENST00000491629 C4orf22Q6V702 233 aa12.27□□□□□ -0.45
USF1-206ENST00000491629 B3GNT6Q6ZMB0 384 aa12.27□□□□□ -0.45
USF1-206ENST00000491629 TRILQ7L0X0 811 aa12.27□□□□□ -0.45
USF1-206ENST00000491629 TMEM251Q8N6I4 163 aa12.27□□□□□ -0.45
USF1-206ENST00000491629 WFDC11Q8NEX6 87 aa12.27□□□□□ -0.45
USF1-206ENST00000491629 NEIL2Q969S2 332 aa12.27□□□□□ -0.45
USF1-206ENST00000491629 ALPK1Q96QP1 1244 aa12.27□□□□□ -0.45
USF1-206ENST00000491629 NDNQ99608 321 aa12.27□□□□□ -0.45
USF1-206ENST00000491629 SEMA4BQ9NPR2 832 aaPredicted RBP12.27□□□□□ -0.45
USF1-206ENST00000491629 TRMT1Q9NXH9 659 aaKnown RBP12.27□□□□□ -0.45
USF1-206ENST00000491629 ZFP69BQ9UJL9 534 aa12.27□□□□□ -0.45
USF1-206ENST00000491629 YARS2Q9Y2Z4 477 aaKnown RBP12.27□□□□□ -0.45
USF1-206ENST00000491629 FBN1P35555 2871 aaKnown RBP12.27□□□□□ -0.45
USF1-206ENST00000491629 OR14I1A6ND48 311 aa12.26□□□□□ -0.45
USF1-206ENST00000491629 KDM4EB2RXH2 506 aaPredicted RBP12.26□□□□□ -0.45
USF1-206ENST00000491629 C8GP07360 202 aa12.26□□□□□ -0.45
USF1-206ENST00000491629 ENDOUP21128 410 aaKnown RBP12.26□□□□□ -0.45
USF1-206ENST00000491629 CCND1P24385 295 aa12.26□□□□□ -0.45
USF1-206ENST00000491629 ZNF75DP51815 510 aa12.26□□□□□ -0.45
USF1-206ENST00000491629 CDKN2DP55273 166 aa12.26□□□□□ -0.45
USF1-206ENST00000491629 TERF2Q15554 542 aa12.26□□□□□ -0.45
USF1-206ENST00000491629 RBM20Q5T481 1227 aaKnown RBP12.26□□□□□ -0.45
USF1-206ENST00000491629 CASC4Q6P4E1 433 aa12.26□□□□□ -0.45
USF1-206ENST00000491629 SEM1Q6ZVN7 128 aa12.26□□□□□ -0.45
USF1-206ENST00000491629 ABHD13Q7L211 337 aa12.26□□□□□ -0.45
USF1-206ENST00000491629 KRTAP1-3Q8IUG1 177 aa12.26□□□□□ -0.45
USF1-206ENST00000491629 ZNF321PQ8N8H1 164 aa12.26□□□□□ -0.45
USF1-206ENST00000491629 CREB3L4Q8TEY5 395 aa12.26□□□□□ -0.45
USF1-206ENST00000491629 MBD6Q96DN6 1003 aa12.26□□□□□ -0.45
USF1-206ENST00000491629 VMP1Q96GC9 406 aa12.26□□□□□ -0.45
USF1-206ENST00000491629 TSGA10Q9BZW7 698 aa12.26□□□□□ -0.45
USF1-206ENST00000491629 CCDC68Q9H2F9 335 aa12.26□□□□□ -0.45
USF1-206ENST00000491629 SLC24A3Q9HC58 644 aa12.26□□□□□ -0.45
USF1-206ENST00000491629 PNO1Q9NRX1 252 aaKnown RBP12.26□□□□□ -0.45
USF1-206ENST00000491629 FBXO5Q9UKT4 447 aa12.26□□□□□ -0.45
USF1-206ENST00000491629 IKZF3Q9UKT9 509 aa12.26□□□□□ -0.45
USF1-206ENST00000491629 ATRQ13535 2644 aa12.26□□□□□ -0.45
USF1-206ENST00000491629 EXPH5Q8NEV8 1989 aa12.26□□□□□ -0.45
USF1-206ENST00000491629 A0A0G2JN53 185 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 MYOCOSA0A1B0GUC4 107 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 A6NNC1 897 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 A8MVJ9 347 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 WWP2O00308 870 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 PAMP19021 973 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 DNASE1P24855 282 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 AHRP35869 848 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 REEP5Q00765 189 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 PLGLB1Q02325 96 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 RGS1Q08116 209 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 SP140Q13342 867 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 THOC5Q13769 683 aaKnown RBP12.25□□□□□ -0.45
USF1-206ENST00000491629 DUPD1Q68J44 220 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 PAOXQ6QHF9 649 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 RELL2Q8NC24 303 aaPredicted RBP12.25□□□□□ -0.45
USF1-206ENST00000491629 RMND5BQ96G75 393 aaPredicted RBP12.25□□□□□ -0.45
USF1-206ENST00000491629 SCYL1Q96KG9 808 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 TSNARE1Q96NA8 513 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 RASL10BQ96S79 203 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 SH3GL2Q99962 352 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 HAUS8Q9BT25 410 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 CLK4Q9HAZ1 481 aaKnown RBP12.25□□□□□ -0.45
USF1-206ENST00000491629 DMRT3Q9NQL9 472 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 HPF1Q9NWY4 346 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 SPRR3Q9UBC9 169 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 MYOTQ9UBF9 498 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 TRMT6Q9UJA5 497 aaKnown RBP12.25□□□□□ -0.45
USF1-206ENST00000491629 CBLCQ9ULV8 474 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 ERVK-11Q9UQG0 969 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 MMACHCQ9Y4U1 282 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 COMMD10Q9Y6G5 202 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 MED12LQ86YW9 2145 aa12.25□□□□□ -0.45
USF1-206ENST00000491629 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.24□□□□□ -0.45
USF1-206ENST00000491629 FIGNL2A6NMB9 653 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 ESPNB1AK53 854 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 AQP7O14520 342 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 BCKDKO14874 412 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 TBX6O95947 436 aaPredicted RBP12.24□□□□□ -0.45
USF1-206ENST00000491629 CCL3P10147 92 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 MAGEA3P43357 314 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 KIR2DL3P43628 341 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 DNASE1L1P49184 302 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 VPS41P49754 854 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 HK2P52789 917 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 SKP1P63208 163 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 SLC25A35Q3KQZ1 300 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 HSP90AA5PQ58FG0 334 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 TOR1AIP1Q5JTV8 583 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 C1orf185Q5T7R7 199 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 ARMC3Q5W041 872 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 NIPAL1Q6NVV3 410 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 POMZP3Q6PJE2 187 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 ADGRD1Q6QNK2 874 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 RGS9BPQ6ZS82 235 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 GSTA5Q7RTV2 222 aa12.24□□□□□ -0.45
USF1-206ENST00000491629 WDR53Q7Z5U6 358 aaPredicted RBP12.24□□□□□ -0.45
USF1-206ENST00000491629 SLC22A16Q86VW1 577 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms