RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 CASP2P42575 452 aa29.38■■■□□ 2.29
LDB1-204ENST00000490751 MSH2P43246 934 aa29.38■■■□□ 2.29
LDB1-204ENST00000490751 E2F2Q14209 437 aa29.38■■■□□ 2.29
LDB1-204ENST00000490751 ZNF766Q5HY98 468 aa29.38■■■□□ 2.29
LDB1-204ENST00000490751 RHEBL1Q8TAI7 183 aa29.38■■■□□ 2.29
LDB1-204ENST00000490751 IFT81Q8WYA0 676 aa29.38■■■□□ 2.29
LDB1-204ENST00000490751 C5orf34Q96MH7 638 aa29.38■■■□□ 2.29
LDB1-204ENST00000490751 F2RL3Q96RI0 385 aa29.38■■■□□ 2.29
LDB1-204ENST00000490751 SERINC2Q96SA4 455 aa29.38■■■□□ 2.29
LDB1-204ENST00000490751 UTP23Q9BRU9 249 aaKnown RBP29.38■■■□□ 2.29
LDB1-204ENST00000490751 PRM3Q9NNZ6 103 aa29.38■■■□□ 2.29
LDB1-204ENST00000490751 PRTFDC1Q9NRG1 225 aa29.38■■■□□ 2.29
LDB1-204ENST00000490751 ANKRD10Q9NXR5 420 aa29.38■■■□□ 2.29
LDB1-204ENST00000490751 PLEKHB1Q9UF11 243 aaPredicted RBP29.38■■■□□ 2.29
LDB1-204ENST00000490751 OSGIN2Q9Y236 505 aa29.38■■■□□ 2.29
LDB1-204ENST00000490751 UTP20O75691 2785 aaKnown RBP29.38■■■□□ 2.29
LDB1-204ENST00000490751 A0A096LPK6 155 aa29.37■■■□□ 2.29
LDB1-204ENST00000490751 SYCE1LA8MT33 242 aa29.37■■■□□ 2.29
LDB1-204ENST00000490751 CTAGE8P0CG41 777 aa29.37■■■□□ 2.29
LDB1-204ENST00000490751 CERS1P27544 350 aa29.37■■■□□ 2.29
LDB1-204ENST00000490751 TDGF1P3P51864 188 aa29.37■■■□□ 2.29
LDB1-204ENST00000490751 MTTPP55157 894 aa29.37■■■□□ 2.29
LDB1-204ENST00000490751 SCUBE1Q8IWY4 988 aa29.37■■■□□ 2.29
LDB1-204ENST00000490751 CTAGE4Q8IX94 777 aa29.37■■■□□ 2.29
LDB1-204ENST00000490751 LGI4Q8N135 537 aa29.37■■■□□ 2.29
LDB1-204ENST00000490751 FAM47BQ8NA70 645 aa29.37■■■□□ 2.29
LDB1-204ENST00000490751 ADAMTS18Q8TE60 1221 aa29.37■■■□□ 2.29
LDB1-204ENST00000490751 SIGLEC12Q96PQ1 595 aa29.37■■■□□ 2.29
LDB1-204ENST00000490751 FMO2Q99518 471 aa29.37■■■□□ 2.29
LDB1-204ENST00000490751 CDCP1Q9H5V8 836 aa29.37■■■□□ 2.29
LDB1-204ENST00000490751 GABRR3A8MPY1 467 aa29.36■■■□□ 2.29
LDB1-204ENST00000490751 ACSL3O95573 720 aa29.36■■■□□ 2.29
LDB1-204ENST00000490751 TYK2P29597 1187 aa29.36■■■□□ 2.29
LDB1-204ENST00000490751 CD96P40200 585 aa29.36■■■□□ 2.29
LDB1-204ENST00000490751 SERPINB8P50452 374 aa29.36■■■□□ 2.29
LDB1-204ENST00000490751 HNRNPFP52597 415 aaKnown RBP29.36■■■□□ 2.29
LDB1-204ENST00000490751 TGM3Q08188 693 aa29.36■■■□□ 2.29
LDB1-204ENST00000490751 RPS19BP1Q86WX3 136 aaKnown RBP29.36■■■□□ 2.29
LDB1-204ENST00000490751 MDS2Q8NDY4 140 aa29.36■■■□□ 2.29
LDB1-204ENST00000490751 TMEM52Q8NDY8 209 aa29.36■■■□□ 2.29
LDB1-204ENST00000490751 NFAM1Q8NET5 270 aaPredicted RBP29.36■■■□□ 2.29
LDB1-204ENST00000490751 ZNF473Q8WTR7 871 aaKnown RBP29.36■■■□□ 2.29
LDB1-204ENST00000490751 UBE2E3Q969T4 207 aa29.36■■■□□ 2.29
LDB1-204ENST00000490751 MS4A8Q9BY19 250 aa29.36■■■□□ 2.29
LDB1-204ENST00000490751 FUT8Q9BYC5 575 aa29.36■■■□□ 2.29
LDB1-204ENST00000490751 TSPYL1Q9H0U9 437 aa29.36■■■□□ 2.29
LDB1-204ENST00000490751 WIPF3A6NGB9 483 aa29.35■■■□□ 2.29
LDB1-204ENST00000490751 KLHL2O95198 593 aa29.35■■■□□ 2.29
LDB1-204ENST00000490751 CRYABP02511 175 aaKnown RBP29.35■■■□□ 2.29
LDB1-204ENST00000490751 ALDOAP04075 364 aaKnown RBP29.35■■■□□ 2.29
LDB1-204ENST00000490751 HSD17B7P56937 341 aa29.35■■■□□ 2.29
LDB1-204ENST00000490751 PMP22Q01453 160 aa29.35■■■□□ 2.29
LDB1-204ENST00000490751 ACAP2Q15057 778 aa29.35■■■□□ 2.29
LDB1-204ENST00000490751 OR1C1Q15619 314 aa29.35■■■□□ 2.29
LDB1-204ENST00000490751 MED27Q6P2C8 311 aa29.35■■■□□ 2.29
LDB1-204ENST00000490751 PRDM7Q9NQW5 492 aa29.35■■■□□ 2.29
LDB1-204ENST00000490751 DAPP1Q9UN19 280 aa29.35■■■□□ 2.29
LDB1-204ENST00000490751 MRPS33Q9Y291 106 aaKnown RBP29.35■■■□□ 2.29
LDB1-204ENST00000490751 CCDC189A1A4V9 331 aa29.34■■■□□ 2.29
LDB1-204ENST00000490751 A1L4Q6 167 aa29.34■■■□□ 2.29
LDB1-204ENST00000490751 CLDN4O14493 209 aa29.34■■■□□ 2.29
LDB1-204ENST00000490751 PCNAP12004 261 aa29.34■■■□□ 2.29
LDB1-204ENST00000490751 GFAPP14136 432 aa29.34■■■□□ 2.29
LDB1-204ENST00000490751 EPB42P16452 691 aa29.34■■■□□ 2.29
LDB1-204ENST00000490751 LIM2P55344 173 aa29.34■■■□□ 2.29
LDB1-204ENST00000490751 OC90Q02509 493 aaPredicted RBP29.34■■■□□ 2.29
LDB1-204ENST00000490751 SRSF11Q05519 484 aaKnown RBP29.34■■■□□ 2.29
LDB1-204ENST00000490751 SETDB1Q15047 1291 aa29.34■■■□□ 2.29
LDB1-204ENST00000490751 C4orf17Q53FE4 359 aa29.34■■■□□ 2.29
LDB1-204ENST00000490751 LAS2Q8IYD9 372 aa29.34■■■□□ 2.29
LDB1-204ENST00000490751 TEX9Q8N6V9 391 aa29.34■■■□□ 2.29
LDB1-204ENST00000490751 DNAJB8Q8NHS0 232 aa29.34■■■□□ 2.29
LDB1-204ENST00000490751 KCNC2Q96PR1 638 aa29.34■■■□□ 2.29
LDB1-204ENST00000490751 CSF3RQ99062 836 aa29.34■■■□□ 2.29
LDB1-204ENST00000490751 HES7Q9BYE0 225 aa29.34■■■□□ 2.29
LDB1-204ENST00000490751 VPS11Q9H270 941 aa29.34■■■□□ 2.29
LDB1-204ENST00000490751 ANGPTL3Q9Y5C1 460 aa29.34■■■□□ 2.29
LDB1-204ENST00000490751 PCDHGB6Q9Y5F9 930 aa29.34■■■□□ 2.29
LDB1-204ENST00000490751 CLDN16Q9Y5I7 305 aa29.34■■■□□ 2.29
LDB1-204ENST00000490751 TGFBR3LH3BV60 316 aa29.33■■■□□ 2.29
LDB1-204ENST00000490751 MYO1DO94832 1006 aa29.33■■■□□ 2.29
LDB1-204ENST00000490751 ECHS1P30084 290 aa29.33■■■□□ 2.29
LDB1-204ENST00000490751 PCDH1Q08174 1060 aa29.33■■■□□ 2.29
LDB1-204ENST00000490751 SLC13A2Q13183 592 aa29.33■■■□□ 2.29
LDB1-204ENST00000490751 NAA30Q147X3 362 aaPredicted RBP29.33■■■□□ 2.29
LDB1-204ENST00000490751 PFKFB4Q16877 469 aa29.33■■■□□ 2.29
LDB1-204ENST00000490751 GLE1Q53GS7 698 aaKnown RBP29.33■■■□□ 2.29
LDB1-204ENST00000490751 SPINK14Q6IE38 97 aa29.33■■■□□ 2.29
LDB1-204ENST00000490751 KLC3Q6P597 504 aa29.33■■■□□ 2.29
LDB1-204ENST00000490751 ZNF595Q8IYB9 648 aa29.33■■■□□ 2.29
LDB1-204ENST00000490751 SRFBP1Q8NEF9 429 aaKnown RBP29.33■■■□□ 2.29
LDB1-204ENST00000490751 SLC44A1Q8WWI5 657 aa29.33■■■□□ 2.29
LDB1-204ENST00000490751 KLHL1Q9NR64 748 aa29.33■■■□□ 2.29
LDB1-204ENST00000490751 PNO1Q9NRX1 252 aaKnown RBP29.33■■■□□ 2.29
LDB1-204ENST00000490751 SH3BGRLO75368 114 aa29.32■■■□□ 2.28
LDB1-204ENST00000490751 TUBB4AP04350 444 aa29.32■■■□□ 2.28
LDB1-204ENST00000490751 INHBAP08476 426 aa29.32■■■□□ 2.28
LDB1-204ENST00000490751 TPP2P29144 1249 aaPredicted RBP29.32■■■□□ 2.28
LDB1-204ENST00000490751 PPP2R1BP30154 601 aa29.32■■■□□ 2.28
LDB1-204ENST00000490751 KCNK10P57789 538 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms