RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 ALOX12P18054 663 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 EPORP19235 508 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 MST1P26927 711 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 TNFRSF8P28908 595 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 TSFMP43897 325 aaKnown RBP6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 SLC6A12P48065 614 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 HSPA7P48741 367 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 TNFSF10P50591 281 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 HNRNPFP52597 415 aaKnown RBP6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 AP1S2P56377 157 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 KCNK10P57789 538 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 ARG2P78540 354 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 REEP5Q00765 189 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 USP10Q14694 798 aaKnown RBP6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 BTBD16Q32M84 506 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 SFT2D3Q587I9 215 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 TOR1AIP1Q5JTV8 583 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 IRAK1BP1Q5VVH5 260 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 FAM219BQ5XKK7 198 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 ZNF324BQ6AW86 544 aaPredicted RBP6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 LRRC8EQ6NSJ5 796 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 ACAD11Q709F0 780 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 MAMDC2Q7Z304 686 aaPredicted RBP6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 CRLF3Q8IUI8 442 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 CA13Q8N1Q1 262 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 RNF175Q8N4F7 328 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 NKAPQ8N5F7 415 aaKnown RBP6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 TMEM52Q8NDY8 209 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 NT5CQ8TCD5 201 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 FBXO25Q8TCJ0 367 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 FAR1Q8WVX9 515 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 SREK1Q8WXA9 508 aaKnown RBP6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 TM9SF4Q92544 642 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 MRRFQ96E11 262 aaKnown RBP6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 SIGLEC12Q96PQ1 595 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 EGFL8Q99944 293 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 LRRC1Q9BTT6 524 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 RHOJQ9H4E5 214 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 CDCP1Q9H5V8 836 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 EPS8L2Q9H6S3 715 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 C7orf69Q9H7B7 122 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 NECTIN3Q9NQS3 549 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 RIC8BQ9NVN3 520 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 WHRNQ9P202 907 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 RNF14Q9UBS8 474 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 CTNNAL1Q9UBT7 734 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 ZFP69BQ9UJL9 534 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 ZNF490Q9ULM2 529 aaPredicted RBP6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 CORO1CQ9ULV4 474 aaPredicted RBP6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 OSGIN2Q9Y236 505 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 OARD1Q9Y530 152 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 SLC22A7Q9Y694 548 aa6.87□□□□□ -1.31
PRPF4B-208ENST00000490653 DNHD1Q96M86 4753 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 CPAMD8Q8IZJ3 1885 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 HMX2A2RU54 273 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 LRRC14BA6NHZ5 514 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 ENO4A6NNW6 628 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 LINC01387J3KSC0 135 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 LRRTM2O43300 516 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 KLHL41O60662 606 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 SH3BGRLO75368 114 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 WDR47O94967 919 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 ENO2P09104 434 aaPredicted RBP6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 CD22P20273 847 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 CCND1P24385 295 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 PPP2R1BP30154 601 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 HNRNPH1P31943 449 aaKnown RBP6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 GRK3P35626 688 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 CD96P40200 585 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 MAGEA4P43358 317 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 AGTR2P50052 363 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 TDGF1P3P51864 188 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 OR4D2P58180 307 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 ETF1P62495 437 aaKnown RBP6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 BTN3A2P78410 334 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 IRF9Q00978 393 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 GUCY2DQ02846 1103 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 ZNF33BQ06732 778 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 ACTN3Q08043 901 aaPredicted RBP6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 PWP1Q13610 501 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 TGFBIQ15582 683 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 NSDHLQ15738 373 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 KBTBD12Q3ZCT8 623 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 COX20Q5RI15 118 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 SPINK14Q6IE38 97 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 H3F3CQ6NXT2 135 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 RPUSD3Q6P087 351 aaKnown RBP6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 PAPD4Q6PIY7 484 aaKnown RBP6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 UBE3DQ7Z6J8 389 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 CMC1Q7Z7K0 106 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 CCDC25Q86WR0 208 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 TRIM42Q8IWZ5 723 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 SRRM1Q8IYB3 904 aaKnown RBP6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 KLHDC8AQ8IYD2 350 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 BEST3Q8N1M1 668 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 PPM1NQ8N819 430 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 ST6GALNAC3Q8NDV1 305 aa6.86□□□□□ -1.31
PRPF4B-208ENST00000490653 NFAM1Q8NET5 270 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms