RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 DARS2Q6PI48 645 aaKnown RBP12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 GOLM1Q8NBJ4 401 aa12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 OR52K1Q8NGK4 314 aa12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 TRIB1Q96RU8 372 aa12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 TIMP4Q99727 224 aa12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 REG4Q9BYZ8 158 aa12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 FAM114A2Q9NRY5 505 aa12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 CATSPERZQ9NTU4 200 aa12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 GALPQ9UBC7 116 aa12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 ANAPC5Q9UJX4 755 aa12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 MED12LQ86YW9 2145 aa12.58□□□□□ -0.4
EXOSC3-207ENST00000490516 A0A1B0GTH6 734 aa12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 MBD3L3A6NE82 208 aaPredicted RBP12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 A8MV72 311 aaPredicted RBP12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 NIPSNAP2O75323 286 aa12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 IL18BPO95998 194 aa12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 CATP04040 527 aaKnown RBP12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 ZNF888P0CJ79 500 aaPredicted RBP12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 ALOX12P18054 663 aa12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 EIF3BP55884 814 aaKnown RBP12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 PRAMEP78395 509 aa12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 ACVR1Q04771 509 aa12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 DUSP8Q13202 625 aa12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 TERF2Q15554 542 aa12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 CLEC12BQ2HXU8 276 aa12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 KLHL38Q2WGJ6 581 aa12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 ACSBG2Q5FVE4 666 aa12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 AARS2Q5JTZ9 985 aaKnown RBP12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 CCDC181Q5TID7 509 aa12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 PLEKHM3Q6ZWE6 761 aa12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 SPNS2Q8IVW8 549 aa12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 RASGEF1CQ8N431 466 aa12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 C9orf106Q8NAJ2 232 aa12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 MBD3L2Q8NHZ7 208 aaPredicted RBP12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 WFIKKN1Q96NZ8 548 aa12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 ACKR4Q9NPB9 350 aa12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 ZNF701Q9NV72 531 aaPredicted RBP12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 ANO10Q9NW15 660 aa12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 KLHL28Q9NXS3 571 aa12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 WIF1Q9Y5W5 379 aa12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 SVEP1Q4LDE5 3571 aa12.57□□□□□ -0.4
EXOSC3-207ENST00000490516 LRRC3CA6NJW4 275 aa12.56□□□□□ -0.4
EXOSC3-207ENST00000490516 TGFBR3LH3BV60 316 aa12.56□□□□□ -0.4
EXOSC3-207ENST00000490516 NDUFS4O43181 175 aa12.56□□□□□ -0.4
EXOSC3-207ENST00000490516 PSTPIP1O43586 416 aa12.56□□□□□ -0.4
EXOSC3-207ENST00000490516 CEP104O60308 925 aa12.56□□□□□ -0.4
EXOSC3-207ENST00000490516 TMIGD3P0DMS9 266 aaPredicted RBP12.56□□□□□ -0.4
EXOSC3-207ENST00000490516 RPS3P23396 243 aaKnown RBP eCLIP12.56□□□□□ -0.4
EXOSC3-207ENST00000490516 HRH2P25021 359 aa12.56□□□□□ -0.4
EXOSC3-207ENST00000490516 ATP5DP30049 168 aa12.56□□□□□ -0.4
EXOSC3-207ENST00000490516 TTPAP49638 278 aa12.56□□□□□ -0.4
EXOSC3-207ENST00000490516 ZBED6P86452 979 aa12.56□□□□□ -0.4
EXOSC3-207ENST00000490516 SLC18A3Q16572 532 aa12.56□□□□□ -0.4
EXOSC3-207ENST00000490516 PARP6Q2NL67 630 aa12.56□□□□□ -0.4
EXOSC3-207ENST00000490516 ADGRD1Q6QNK2 874 aa12.56□□□□□ -0.4
EXOSC3-207ENST00000490516 RCOR2Q8IZ40 523 aa12.56□□□□□ -0.4
EXOSC3-207ENST00000490516 LRRC25Q8N386 305 aaPredicted RBP12.56□□□□□ -0.4
EXOSC3-207ENST00000490516 MFSD9Q8NBP5 474 aa12.56□□□□□ -0.4
EXOSC3-207ENST00000490516 TMEM171Q8WVE6 324 aa12.56□□□□□ -0.4
EXOSC3-207ENST00000490516 ZBED6CLQ96FA7 236 aaPredicted RBP12.56□□□□□ -0.4
EXOSC3-207ENST00000490516 SGCZQ96LD1 299 aa12.56□□□□□ -0.4
EXOSC3-207ENST00000490516 SLC30A3Q99726 388 aa12.56□□□□□ -0.4
EXOSC3-207ENST00000490516 GOLPH3Q9H4A6 298 aa12.56□□□□□ -0.4
EXOSC3-207ENST00000490516 ZFP64Q9NPA5 681 aa12.56□□□□□ -0.4
EXOSC3-207ENST00000490516 CAMK2AQ9UQM7 478 aa12.56□□□□□ -0.4
EXOSC3-207ENST00000490516 DYSFO75923 2080 aa12.56□□□□□ -0.4
EXOSC3-207ENST00000490516 CD8B2A6NJW9 211 aa12.55□□□□□ -0.4
EXOSC3-207ENST00000490516 PSMD12O00232 456 aaPredicted RBP12.55□□□□□ -0.4
EXOSC3-207ENST00000490516 SNPHO15079 494 aa12.55□□□□□ -0.4
EXOSC3-207ENST00000490516 CD3EAPO15446 510 aaKnown RBP12.55□□□□□ -0.4
EXOSC3-207ENST00000490516 SERPIND1P05546 499 aa12.55□□□□□ -0.4
EXOSC3-207ENST00000490516 RNH1P13489 461 aaKnown RBP12.55□□□□□ -0.4
EXOSC3-207ENST00000490516 IMPA1P29218 277 aa12.55□□□□□ -0.4
EXOSC3-207ENST00000490516 MC3RP41968 323 aa12.55□□□□□ -0.4
EXOSC3-207ENST00000490516 KCNJ2P63252 427 aa12.55□□□□□ -0.4
EXOSC3-207ENST00000490516 STX1AQ16623 288 aa12.55□□□□□ -0.4
EXOSC3-207ENST00000490516 PRAMEF20Q5VT98 475 aa12.55□□□□□ -0.4
EXOSC3-207ENST00000490516 SASS6Q6UVJ0 657 aa12.55□□□□□ -0.4
EXOSC3-207ENST00000490516 HSDL2Q6YN16 418 aa12.55□□□□□ -0.4
EXOSC3-207ENST00000490516 RBM43Q6ZSC3 357 aaKnown RBP12.55□□□□□ -0.4
EXOSC3-207ENST00000490516 KATNAL2Q8IYT4 538 aa12.55□□□□□ -0.4
EXOSC3-207ENST00000490516 ZNF441Q8N8Z8 693 aa12.55□□□□□ -0.4
EXOSC3-207ENST00000490516 ROBO4Q8WZ75 1007 aa12.55□□□□□ -0.4
EXOSC3-207ENST00000490516 JSRP1Q96MG2 331 aaPredicted RBP12.55□□□□□ -0.4
EXOSC3-207ENST00000490516 BIRC8Q96P09 236 aa12.55□□□□□ -0.4
EXOSC3-207ENST00000490516 PANX2Q96RD6 677 aa12.55□□□□□ -0.4
EXOSC3-207ENST00000490516 PRDM14Q9GZV8 571 aa12.55□□□□□ -0.4
EXOSC3-207ENST00000490516 LRTM1Q9HBL6 345 aa12.55□□□□□ -0.4
EXOSC3-207ENST00000490516 GTF3C3Q9Y5Q9 886 aa12.55□□□□□ -0.4
EXOSC3-207ENST00000490516 MED12Q93074 2177 aa12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 AVILO75366 819 aa12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 NDUFS3O75489 264 aa12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 CRYGSP22914 178 aa12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 LOXP28300 417 aaPredicted RBP12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 FMO4P31512 558 aa12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 CPOXP36551 454 aa12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 TBPL1P62380 186 aa12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 SKP1P63208 163 aa12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 BMPR2Q13873 1038 aa12.54□□□□□ -0.4
EXOSC3-207ENST00000490516 NR1I3Q14994 352 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms