RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 OR4D2P58180 307 aa9.74□□□□□ -0.85
TTC28-207ENST00000490475 SNRPNP63162 240 aaKnown RBP9.74□□□□□ -0.85
TTC28-207ENST00000490475 FAM83EQ2M2I3 478 aa9.74□□□□□ -0.85
TTC28-207ENST00000490475 SFT2D3Q587I9 215 aa9.74□□□□□ -0.85
TTC28-207ENST00000490475 C1QL3Q5VWW1 255 aa9.74□□□□□ -0.85
TTC28-207ENST00000490475 SP5Q6BEB4 398 aaPredicted RBP9.74□□□□□ -0.85
TTC28-207ENST00000490475 PAPD4Q6PIY7 484 aaKnown RBP9.74□□□□□ -0.85
TTC28-207ENST00000490475 ADGRD1Q6QNK2 874 aa9.74□□□□□ -0.85
TTC28-207ENST00000490475 BNC2Q6ZN30 1099 aaPredicted RBP9.74□□□□□ -0.85
TTC28-207ENST00000490475 PLD6Q8N2A8 252 aaKnown RBP9.74□□□□□ -0.85
TTC28-207ENST00000490475 AFAP1L2Q8N4X5 818 aa9.74□□□□□ -0.85
TTC28-207ENST00000490475 KCT2Q8NC54 265 aa9.74□□□□□ -0.85
TTC28-207ENST00000490475 ZNF740Q8NDX6 193 aa9.74□□□□□ -0.85
TTC28-207ENST00000490475 C7orf57Q8NEG2 295 aa9.74□□□□□ -0.85
TTC28-207ENST00000490475 TTLQ8NG68 377 aa9.74□□□□□ -0.85
TTC28-207ENST00000490475 UBLCP1Q8WVY7 318 aaPredicted RBP9.74□□□□□ -0.85
TTC28-207ENST00000490475 EXT2Q93063 718 aa9.74□□□□□ -0.85
TTC28-207ENST00000490475 NEIL2Q969S2 332 aa9.74□□□□□ -0.85
TTC28-207ENST00000490475 MARVELD3Q96A59 401 aa9.74□□□□□ -0.85
TTC28-207ENST00000490475 SEC16BQ96JE7 1060 aa9.74□□□□□ -0.85
TTC28-207ENST00000490475 MAGED4Q96JG8 741 aa9.74□□□□□ -0.85
TTC28-207ENST00000490475 AIF1LQ9BQI0 150 aa9.74□□□□□ -0.85
TTC28-207ENST00000490475 MESP1Q9BRJ9 268 aa9.74□□□□□ -0.85
TTC28-207ENST00000490475 FAM107BQ9H098 131 aa9.74□□□□□ -0.85
TTC28-207ENST00000490475 PELI2Q9HAT8 420 aa9.74□□□□□ -0.85
TTC28-207ENST00000490475 HCN3Q9P1Z3 774 aa9.74□□□□□ -0.85
TTC28-207ENST00000490475 ZNF180Q9UJW8 692 aa9.74□□□□□ -0.85
TTC28-207ENST00000490475 PTBP2Q9UKA9 531 aaKnown RBP9.74□□□□□ -0.85
TTC28-207ENST00000490475 DYRK1BQ9Y463 629 aa9.74□□□□□ -0.85
TTC28-207ENST00000490475 KCNE2Q9Y6J6 123 aa9.74□□□□□ -0.85
TTC28-207ENST00000490475 CROCCQ5TZA2 2017 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 GTF3C1Q12789 2109 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 FOXO6A8MYZ6 492 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 UBXN8O00124 270 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 FCHO1O14526 889 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 GALR3O60755 368 aaPredicted RBP9.73□□□□□ -0.85
TTC28-207ENST00000490475 SLC19A2O60779 497 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 RDH16O75452 317 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 WDR47O94967 919 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 SNRPAP09012 282 aaKnown RBP9.73□□□□□ -0.85
TTC28-207ENST00000490475 ESRRAP11474 423 aaPredicted RBP9.73□□□□□ -0.85
TTC28-207ENST00000490475 MTHFD2P13995 350 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 GGT5P36269 586 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 MAGEA12P43365 314 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 HSPA7P48741 367 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 KCNK10P57789 538 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 STXBP1P61764 594 aaKnown RBP9.73□□□□□ -0.85
TTC28-207ENST00000490475 RHAGQ02094 409 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 ALDH6A1Q02252 535 aaKnown RBP9.73□□□□□ -0.85
TTC28-207ENST00000490475 SRSF11Q05519 484 aaKnown RBP9.73□□□□□ -0.85
TTC28-207ENST00000490475 TUBA3CQ13748 450 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 CASP8Q14790 479 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 ACAP2Q15057 778 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 OR1C1Q15619 314 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 LGSNQ5TDP6 509 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 SULT1C3Q6IMI6 304 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 TUBA3EQ6PEY2 450 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 QSOX2Q6ZRP7 698 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 LANCL3Q6ZV70 420 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 TAOK1Q7L7X3 1001 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 BEST3Q8N1M1 668 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 POGLUT1Q8NBL1 392 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 ZCCHC10Q8TBK6 192 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 NT5CQ8TCD5 201 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 ADAMTS18Q8TE60 1221 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 SLC5A11Q8WWX8 675 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.73□□□□□ -0.85
TTC28-207ENST00000490475 ISL2Q96A47 359 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 TMEM125Q96AQ2 219 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 PEX11GQ96HA9 241 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 ATOH8Q96SQ7 321 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 CCDC77Q9BR77 488 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 TMEM79Q9BSE2 394 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 CAPS2Q9BXY5 557 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 PITHD1Q9GZP4 211 aaPredicted RBP9.73□□□□□ -0.85
TTC28-207ENST00000490475 SPNS1Q9H2V7 528 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 WWOXQ9NZC7 414 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 TBK1Q9UHD2 729 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 ASB1Q9Y576 335 aa9.73□□□□□ -0.85
TTC28-207ENST00000490475 PKDREJQ9NTG1 2253 aa9.72□□□□□ -0.85
TTC28-207ENST00000490475 LRBAP50851 2863 aa9.72□□□□□ -0.85
TTC28-207ENST00000490475 ASPDHA6ND91 283 aa9.72□□□□□ -0.85
TTC28-207ENST00000490475 GABRR3A8MPY1 467 aa9.72□□□□□ -0.85
TTC28-207ENST00000490475 SUPT3HB4E1H0 165 aa9.72□□□□□ -0.85
TTC28-207ENST00000490475 CCNT2O60583 730 aaKnown RBP9.72□□□□□ -0.85
TTC28-207ENST00000490475 PRMT3O60678 531 aa9.72□□□□□ -0.85
TTC28-207ENST00000490475 KERAO60938 352 aa9.72□□□□□ -0.85
TTC28-207ENST00000490475 H2AFYO75367 372 aaKnown RBP9.72□□□□□ -0.85
TTC28-207ENST00000490475 SUPT3HO75486 399 aa9.72□□□□□ -0.85
TTC28-207ENST00000490475 STK16O75716 305 aa9.72□□□□□ -0.85
TTC28-207ENST00000490475 S100BP04271 92 aaPredicted RBP9.72□□□□□ -0.85
TTC28-207ENST00000490475 SERPINA6P08185 405 aa9.72□□□□□ -0.85
TTC28-207ENST00000490475 CELA2AP08217 269 aa9.72□□□□□ -0.85
TTC28-207ENST00000490475 RNH1P13489 461 aaKnown RBP9.72□□□□□ -0.85
TTC28-207ENST00000490475 CNTFP26441 200 aa9.72□□□□□ -0.85
TTC28-207ENST00000490475 HSD17B3P37058 310 aa9.72□□□□□ -0.85
TTC28-207ENST00000490475 SCTRP47872 440 aa9.72□□□□□ -0.85
TTC28-207ENST00000490475 CYB561P49447 251 aa9.72□□□□□ -0.85
TTC28-207ENST00000490475 HNRNPH2P55795 449 aaKnown RBP9.72□□□□□ -0.85
TTC28-207ENST00000490475 SLC26A5P58743 744 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms