RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 TUBB4AP04350 444 aa16.57■□□□□ 0.24
YIPF3-208ENST00000490447 ARL4CP56559 192 aa16.57■□□□□ 0.24
YIPF3-208ENST00000490447 RAB38P57729 211 aa16.57■□□□□ 0.24
YIPF3-208ENST00000490447 ZNF460Q14592 562 aa16.57■□□□□ 0.24
YIPF3-208ENST00000490447 STEAP4Q687X5 459 aa16.57■□□□□ 0.24
YIPF3-208ENST00000490447 TRIM40Q6P9F5 258 aa16.57■□□□□ 0.24
YIPF3-208ENST00000490447 PAOXQ6QHF9 649 aa16.57■□□□□ 0.24
YIPF3-208ENST00000490447 CEP128Q6ZU80 1094 aa16.57■□□□□ 0.24
YIPF3-208ENST00000490447 SYDE1Q6ZW31 735 aaPredicted RBP16.57■□□□□ 0.24
YIPF3-208ENST00000490447 SCUBE1Q8IWY4 988 aa16.57■□□□□ 0.24
YIPF3-208ENST00000490447 KLHDC8AQ8IYD2 350 aa16.57■□□□□ 0.24
YIPF3-208ENST00000490447 FAM47BQ8NA70 645 aa16.57■□□□□ 0.24
YIPF3-208ENST00000490447 ZFP62Q8NB50 900 aaPredicted RBP16.57■□□□□ 0.24
YIPF3-208ENST00000490447 C16orf52Q8NHV5 167 aa16.57■□□□□ 0.24
YIPF3-208ENST00000490447 ASB5Q8WWX0 329 aa16.57■□□□□ 0.24
YIPF3-208ENST00000490447 PWWP2AQ96N64 755 aa16.57■□□□□ 0.24
YIPF3-208ENST00000490447 CAPS2Q9BXY5 557 aa16.57■□□□□ 0.24
YIPF3-208ENST00000490447 ENKD1Q9H0I2 346 aa16.57■□□□□ 0.24
YIPF3-208ENST00000490447 TP63Q9H3D4 680 aaPredicted RBP16.57■□□□□ 0.24
YIPF3-208ENST00000490447 COPS7BQ9H9Q2 264 aaPredicted RBP16.57■□□□□ 0.24
YIPF3-208ENST00000490447 HPF1Q9NWY4 346 aa16.57■□□□□ 0.24
YIPF3-208ENST00000490447 KCMF1Q9P0J7 381 aa16.57■□□□□ 0.24
YIPF3-208ENST00000490447 TEX264Q9Y6I9 313 aa16.57■□□□□ 0.24
YIPF3-208ENST00000490447 PCNX1Q96RV3 2341 aa16.57■□□□□ 0.24
YIPF3-208ENST00000490447 NCF1BA6NI72 391 aaPredicted RBP16.56■□□□□ 0.24
YIPF3-208ENST00000490447 NCF1CA8MVU1 366 aaPredicted RBP16.56■□□□□ 0.24
YIPF3-208ENST00000490447 ZSCAN12O43309 604 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 ZFAND5O76080 213 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 NCF1P14598 390 aaPredicted RBP16.56■□□□□ 0.24
YIPF3-208ENST00000490447 HNRNPH1P31943 449 aaKnown RBP16.56■□□□□ 0.24
YIPF3-208ENST00000490447 GDF5P43026 501 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 SLC12A2P55011 1212 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 PLGLB1Q02325 96 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 MGAT5Q09328 741 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 BMPR2Q13873 1038 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 RUNX2Q13950 521 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 RCN2Q14257 317 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 FRG1Q14331 258 aaKnown RBP16.56■□□□□ 0.24
YIPF3-208ENST00000490447 TSNQ15631 228 aaKnown RBP16.56■□□□□ 0.24
YIPF3-208ENST00000490447 CMPK2Q5EBM0 449 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 MDGA2Q7Z553 956 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 CDH24Q86UP0 819 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 ZC3HC1Q86WB0 502 aaKnown RBP16.56■□□□□ 0.24
YIPF3-208ENST00000490447 ANKMY2Q8IV38 441 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 GPALPP1Q8IXQ4 340 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 ZNF595Q8IYB9 648 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 PSD4Q8NDX1 1056 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 ASB15Q8WXK1 588 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 MS4A6EQ96DS6 147 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 SEC16BQ96JE7 1060 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 RUNDC3BQ96NL0 473 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 REXO4Q9GZR2 422 aaKnown RBP16.56■□□□□ 0.24
YIPF3-208ENST00000490447 AICDAQ9GZX7 198 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 MCCC2Q9HCC0 563 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 PRM3Q9NNZ6 103 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 ADAP2Q9NPF8 381 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 NSMCE4AQ9NXX6 385 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 PSAT1Q9Y617 370 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 CLCA3PQ9Y6N3 262 aa16.56■□□□□ 0.24
YIPF3-208ENST00000490447 LRIT2A6NDA9 550 aa16.55■□□□□ 0.24
YIPF3-208ENST00000490447 PDE9AO76083 593 aa16.55■□□□□ 0.24
YIPF3-208ENST00000490447 IFNA16P05015 189 aa16.55■□□□□ 0.24
YIPF3-208ENST00000490447 TCP1P17987 556 aaKnown RBP16.55■□□□□ 0.24
YIPF3-208ENST00000490447 IVDP26440 423 aa16.55■□□□□ 0.24
YIPF3-208ENST00000490447 PLA2G16P53816 162 aa16.55■□□□□ 0.24
YIPF3-208ENST00000490447 DR1Q01658 176 aa16.55■□□□□ 0.24
YIPF3-208ENST00000490447 ELAVL1Q15717 326 aaKnown RBP16.55■□□□□ 0.24
YIPF3-208ENST00000490447 SLCO4C1Q6ZQN7 724 aa16.55■□□□□ 0.24
YIPF3-208ENST00000490447 KLHL7Q8IXQ5 586 aa16.55■□□□□ 0.24
YIPF3-208ENST00000490447 TMEM132CQ8N3T6 1108 aa16.55■□□□□ 0.24
YIPF3-208ENST00000490447 OR2L5Q8NG80 312 aa16.55■□□□□ 0.24
YIPF3-208ENST00000490447 RHBDF1Q96CC6 855 aa16.55■□□□□ 0.24
YIPF3-208ENST00000490447 WDR83Q9BRX9 315 aaKnown RBP16.55■□□□□ 0.24
YIPF3-208ENST00000490447 WWOXQ9NZC7 414 aa16.55■□□□□ 0.24
YIPF3-208ENST00000490447 GPRC5BQ9NZH0 403 aa16.55■□□□□ 0.24
YIPF3-208ENST00000490447 ZNF223Q9UK11 482 aaPredicted RBP16.55■□□□□ 0.24
YIPF3-208ENST00000490447 PPIEQ9UNP9 301 aaKnown RBP16.55■□□□□ 0.24
YIPF3-208ENST00000490447 ANKRD17O75179 2603 aaKnown RBP16.55■□□□□ 0.24
YIPF3-208ENST00000490447 CLGNO14967 610 aa16.54■□□□□ 0.24
YIPF3-208ENST00000490447 CLEC3AO75596 197 aa16.54■□□□□ 0.24
YIPF3-208ENST00000490447 OR2J2O76002 312 aa16.54■□□□□ 0.24
YIPF3-208ENST00000490447 PPP2R1BP30154 601 aa16.54■□□□□ 0.24
YIPF3-208ENST00000490447 CHRNB4P30926 498 aa16.54■□□□□ 0.24
YIPF3-208ENST00000490447 SLC6A12P48065 614 aa16.54■□□□□ 0.24
YIPF3-208ENST00000490447 TAS2R39P59534 338 aa16.54■□□□□ 0.24
YIPF3-208ENST00000490447 KRTAP10-9P60411 292 aa16.54■□□□□ 0.24
YIPF3-208ENST00000490447 TGM3Q08188 693 aa16.54■□□□□ 0.24
YIPF3-208ENST00000490447 TGFBIQ15582 683 aa16.54■□□□□ 0.24
YIPF3-208ENST00000490447 IL20RBQ6UXL0 311 aa16.54■□□□□ 0.24
YIPF3-208ENST00000490447 CLNKQ7Z7G1 428 aa16.54■□□□□ 0.24
YIPF3-208ENST00000490447 TCAIMQ8N3R3 496 aa16.54■□□□□ 0.24
YIPF3-208ENST00000490447 FBXO36Q8NEA4 188 aa16.54■□□□□ 0.24
YIPF3-208ENST00000490447 OR52N2Q8NGI0 321 aa16.54■□□□□ 0.24
YIPF3-208ENST00000490447 ANKRD49Q8WVL7 239 aa16.54■□□□□ 0.24
YIPF3-208ENST00000490447 RND1Q92730 232 aa16.54■□□□□ 0.24
YIPF3-208ENST00000490447 DAZLQ92904 295 aaKnown RBP16.54■□□□□ 0.24
YIPF3-208ENST00000490447 SERINC2Q96SA4 455 aa16.54■□□□□ 0.24
YIPF3-208ENST00000490447 PITHD1Q9GZP4 211 aaPredicted RBP16.54■□□□□ 0.24
YIPF3-208ENST00000490447 CNOT10Q9H9A5 744 aaKnown RBP16.54■□□□□ 0.24
YIPF3-208ENST00000490447 POPDC3Q9HBV1 291 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms