RNA–Protein interactions for RNA: ENST00000489852.1

SDHAF3-204, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 3

Gene SDHAF3, Length 360 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-204ENST00000489852 ZNF704Q6ZNC4 412 aaPredicted RBP13.36□□□□□ -0.27
SDHAF3-204ENST00000489852 DNM1P46Q6ZS02 220 aa13.36□□□□□ -0.27
SDHAF3-204ENST00000489852 IL17RELQ6ZVW7 336 aa13.36□□□□□ -0.27
SDHAF3-204ENST00000489852 ASPGQ86U10 573 aa13.36□□□□□ -0.27
SDHAF3-204ENST00000489852 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.36□□□□□ -0.27
SDHAF3-204ENST00000489852 SLC13A3Q8WWT9 602 aa13.36□□□□□ -0.27
SDHAF3-204ENST00000489852 ZFP3Q96NJ6 502 aa13.36□□□□□ -0.27
SDHAF3-204ENST00000489852 FAM111AQ96PZ2 611 aa13.36□□□□□ -0.27
SDHAF3-204ENST00000489852 C12orf65Q9H3J6 166 aaKnown RBP13.36□□□□□ -0.27
SDHAF3-204ENST00000489852 TMEM184CQ9NVA4 438 aa13.36□□□□□ -0.27
SDHAF3-204ENST00000489852 CTTNBP2NLQ9P2B4 639 aa13.36□□□□□ -0.27
SDHAF3-204ENST00000489852 TSR3Q9UJK0 312 aaKnown RBP13.36□□□□□ -0.27
SDHAF3-204ENST00000489852 PACSIN3Q9UKS6 424 aa13.36□□□□□ -0.27
SDHAF3-204ENST00000489852 PCDHA13Q9Y5I0 950 aa13.36□□□□□ -0.27
SDHAF3-204ENST00000489852 FREM3P0C091 2139 aa13.36□□□□□ -0.27
SDHAF3-204ENST00000489852 TRRAPQ9Y4A5 3859 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 LRRC3CA6NJW4 275 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 ZNF839A8K0R7 811 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 HS3ST1O14792 307 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 LMX1BO60663 402 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 CST8O60676 142 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 MATN4O95460 622 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 SLC35G6P0C7Q6 338 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 HSD17B2P37059 387 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 HK2P52789 917 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 SQLEQ14534 574 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 DEFB134Q4QY38 66 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 THEMIS2Q5TEJ8 643 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 SLC22A10Q63ZE4 541 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 VASNQ6EMK4 673 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 OPN5Q6U736 354 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 PLXDC2Q6UX71 529 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 HSDL2Q6YN16 418 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 SH2D5Q6ZV89 423 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 ZNF550Q7Z398 422 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 C3orf56Q8N813 242 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 PPHLN1Q8NEY8 458 aaKnown RBP13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 SLC44A1Q8WWI5 657 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 P3H4Q92791 437 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 INTS12Q96CB8 462 aaKnown RBP13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 PDLIM2Q96JY6 352 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 JSRP1Q96MG2 331 aaPredicted RBP13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 QKIQ96PU8 341 aaKnown RBP eCLIP13.35□□□□□ -0.274e-15■■■■■ 50.5
SDHAF3-204ENST00000489852 TNFRSF13CQ96RJ3 184 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 FREM1Q5H8C1 2179 aa13.35□□□□□ -0.27
SDHAF3-204ENST00000489852 E7ENX8 843 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 OVOL3O00110 214 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 MYO1CO00159 1063 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 PSMD12O00232 456 aaPredicted RBP13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 KPNA5O15131 536 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 TCF21O43680 179 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 ZNF354AO60765 605 aaPredicted RBP13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 AVILO75366 819 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 RCBTB2O95199 551 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 B3GALT4O96024 378 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 GDF1P27539 372 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 PCYT1AP49585 367 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 VLDLRP98155 873 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 TFDP2Q14188 446 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 PRAMEF20Q5VT98 475 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 CYB5R2Q6BCY4 276 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 PTRHD1Q6GMV3 140 aaKnown RBP13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 CAPN13Q6MZZ7 669 aaPredicted RBP13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 MFSD7Q6UXD7 560 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 AFAP1L2Q8N4X5 818 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 ZNF740Q8NDX6 193 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 GTPBP3Q969Y2 492 aaKnown RBP13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 ANKRD9Q96BM1 317 aaPredicted RBP13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 LRRC45Q96CN5 670 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 C1orf159Q96HA4 380 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 WDYHV1Q96HA8 205 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 MRFAP1L1Q96HT8 127 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 PANX3Q96QZ0 392 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 PANX2Q96RD6 677 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 PKP4Q99569 1192 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 TM9SF2Q99805 663 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 FERMT1Q9BQL6 677 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 RHNO1Q9BSD3 238 aa13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 LIMA1Q9UHB6 759 aaKnown RBP13.34□□□□□ -0.27
SDHAF3-204ENST00000489852 HACD1B0YJ81 288 aa13.33□□□□□ -0.28
SDHAF3-204ENST00000489852 MSTNO14793 375 aa13.33□□□□□ -0.28
SDHAF3-204ENST00000489852 TRAPPC6AO75865 159 aa13.33□□□□□ -0.28
SDHAF3-204ENST00000489852 PLAUP00749 431 aa13.33□□□□□ -0.28
SDHAF3-204ENST00000489852 ALOX12P18054 663 aa13.33□□□□□ -0.28
SDHAF3-204ENST00000489852 HRH2P25021 359 aa13.33□□□□□ -0.28
SDHAF3-204ENST00000489852 PSMA3P25788 255 aa13.33□□□□□ -0.28
SDHAF3-204ENST00000489852 UGT2B10P36537 528 aa13.33□□□□□ -0.28
SDHAF3-204ENST00000489852 PPARGP37231 505 aaPredicted RBP13.33□□□□□ -0.28
SDHAF3-204ENST00000489852 COILP38432 576 aaPredicted RBP13.33□□□□□ -0.28
SDHAF3-204ENST00000489852 CD79BP40259 229 aa13.33□□□□□ -0.28
SDHAF3-204ENST00000489852 SLCO1A2P46721 670 aa13.33□□□□□ -0.28
SDHAF3-204ENST00000489852 EIF3BP55884 814 aaKnown RBP13.33□□□□□ -0.28
SDHAF3-204ENST00000489852 EEF1A1P68104 462 aaKnown RBP13.33□□□□□ -0.28
SDHAF3-204ENST00000489852 PDCD2Q16342 344 aaPredicted RBP13.33□□□□□ -0.28
SDHAF3-204ENST00000489852 EEF1A1P5Q5VTE0 462 aa13.33□□□□□ -0.28
SDHAF3-204ENST00000489852 ADGRD1Q6QNK2 874 aa13.33□□□□□ -0.28
SDHAF3-204ENST00000489852 MILR1Q7Z6M3 343 aa13.33□□□□□ -0.28
SDHAF3-204ENST00000489852 LDB1Q86U70 411 aaPredicted RBP13.33□□□□□ -0.28
SDHAF3-204ENST00000489852 GCNT2Q8N0V5 402 aa13.33□□□□□ -0.28
SDHAF3-204ENST00000489852 DEPDC4Q8N2C3 294 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms