RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 ANXA8L1Q5VT79 327 aa20.56■□□□□ 0.88
SMC4-221ENST00000489573 MRM1Q6IN84 353 aaKnown RBP20.56■□□□□ 0.88
SMC4-221ENST00000489573 TMEM214Q6NUQ4 689 aaKnown RBP20.56■□□□□ 0.88
SMC4-221ENST00000489573 USP53Q70EK8 1073 aa20.56■□□□□ 0.88
SMC4-221ENST00000489573 ARPINQ7Z6K5 226 aa20.56■□□□□ 0.88
SMC4-221ENST00000489573 SERHLQ9NQF3 203 aa20.56■□□□□ 0.88
SMC4-221ENST00000489573 MIEF1Q9NQG6 463 aa20.56■□□□□ 0.88
SMC4-221ENST00000489573 TMEM181Q9P2C4 612 aa20.56■□□□□ 0.88
SMC4-221ENST00000489573 HCN4Q9Y3Q4 1203 aa20.56■□□□□ 0.88
SMC4-221ENST00000489573 TXNDC9O14530 226 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 SCN2BO60939 215 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 GUCY1B2O75343 617 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 B3GALT4O96024 378 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 DDX5P17844 614 aaKnown RBP20.55■□□□□ 0.88
SMC4-221ENST00000489573 ZNF10P21506 573 aaPredicted RBP20.55■□□□□ 0.88
SMC4-221ENST00000489573 SLC6A2P23975 617 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 GABRA4P48169 554 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 SQSTM1Q13501 440 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 PRSS42Q7Z5A4 293 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 ANKRD46Q86W74 232 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 MMP21Q8N119 569 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 CGREF1Q99674 301 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 FAIM2Q9BWQ8 316 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 LYARQ9NX58 379 aaKnown RBP20.55■□□□□ 0.88
SMC4-221ENST00000489573 TEX10Q9NXF1 929 aaPredicted RBP20.55■□□□□ 0.88
SMC4-221ENST00000489573 TMEM9Q9P0T7 183 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 SEMA5BQ9P283 1151 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 ABCD2Q9UBJ2 740 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 PLCL2Q9UPR0 1127 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 PCDHGB2Q9Y5G2 931 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 A0A096LPI6 279 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 TBX19O60806 448 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 ERN1O75460 977 aaKnown RBP20.55■□□□□ 0.88
SMC4-221ENST00000489573 CKMT1AP12532 417 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 ALOX12P18054 663 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 DUSP3P51452 185 aaPredicted RBP20.55■□□□□ 0.88
SMC4-221ENST00000489573 HNRNPFP52597 415 aaKnown RBP20.55■□□□□ 0.88
SMC4-221ENST00000489573 DAB2P98082 770 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 CEACAM7Q14002 265 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 INAVAQ3KP66 663 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 GLIPR1L2Q4G1C9 344 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 WASHC2DQ5SRD0 308 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 DNAJC14Q6Y2X3 702 aaPredicted RBP20.55■□□□□ 0.88
SMC4-221ENST00000489573 HPS6Q86YV9 775 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 TICAM1Q8IUC6 712 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 KIAA2013Q8IYS2 634 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 VPS37AQ8NEZ2 397 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 DNAJB14Q8TBM8 379 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 SERINC2Q96SA4 455 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 NUDT22Q9BRQ3 303 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 BTNL2Q9UIR0 455 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 PACSIN3Q9UKS6 424 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 ASB4Q9Y574 426 aa20.55■□□□□ 0.88
SMC4-221ENST00000489573 PRSS51A0A1B0GVH4 220 aa20.54■□□□□ 0.88
SMC4-221ENST00000489573 LNP1A1A4G5 178 aa20.54■□□□□ 0.88
SMC4-221ENST00000489573 A8MUI8 341 aa20.54■□□□□ 0.88
SMC4-221ENST00000489573 RFXANKO14593 260 aa20.54■□□□□ 0.88
SMC4-221ENST00000489573 RETP07949 1114 aa20.54■□□□□ 0.88
SMC4-221ENST00000489573 DRD2P14416 443 aa20.54■□□□□ 0.88
SMC4-221ENST00000489573 ALDH9A1P49189 494 aa20.54■□□□□ 0.88
SMC4-221ENST00000489573 SNRPNP63162 240 aaKnown RBP20.54■□□□□ 0.88
SMC4-221ENST00000489573 HSD11B2P80365 405 aa20.54■□□□□ 0.88
SMC4-221ENST00000489573 LRRC74AQ0VAA2 488 aa20.54■□□□□ 0.88
SMC4-221ENST00000489573 PRTGQ2VWP7 1150 aa20.54■□□□□ 0.88
SMC4-221ENST00000489573 DEFB134Q4QY38 66 aa20.54■□□□□ 0.88
SMC4-221ENST00000489573 SAMD4BQ5PRF9 694 aaKnown RBP20.54■□□□□ 0.88
SMC4-221ENST00000489573 LRIF1Q5T3J3 769 aa20.54■□□□□ 0.88
SMC4-221ENST00000489573 SLC15A3Q8IY34 581 aa20.54■□□□□ 0.88
SMC4-221ENST00000489573 CCDC124Q96CT7 223 aaKnown RBP20.54■□□□□ 0.88
SMC4-221ENST00000489573 ZNF764Q96H86 408 aaPredicted RBP20.54■□□□□ 0.88
SMC4-221ENST00000489573 ZNF285Q96NJ3 590 aa20.54■□□□□ 0.88
SMC4-221ENST00000489573 CCDC115Q96NT0 180 aa20.54■□□□□ 0.88
SMC4-221ENST00000489573 INPP5KQ9BT40 448 aa20.54■□□□□ 0.88
SMC4-221ENST00000489573 PAIP1Q9H074 479 aaKnown RBP20.54■□□□□ 0.88
SMC4-221ENST00000489573 STARD5Q9NSY2 213 aa20.54■□□□□ 0.88
SMC4-221ENST00000489573 DNAAF2Q9NVR5 837 aaKnown RBP20.54■□□□□ 0.88
SMC4-221ENST00000489573 MRPS2Q9Y399 296 aaKnown RBP20.54■□□□□ 0.88
SMC4-221ENST00000489573 PCDHA9Q9Y5H5 950 aa20.54■□□□□ 0.88
SMC4-221ENST00000489573 SLC22A7Q9Y694 548 aa20.54■□□□□ 0.88
SMC4-221ENST00000489573 RNASET2O00584 256 aaKnown RBP20.53■□□□□ 0.88
SMC4-221ENST00000489573 RPLP0P05388 317 aaKnown RBP20.53■□□□□ 0.88
SMC4-221ENST00000489573 ME2P23368 584 aa20.53■□□□□ 0.88
SMC4-221ENST00000489573 GRK6P43250 576 aa20.53■□□□□ 0.88
SMC4-221ENST00000489573 TRPC1P48995 793 aa20.53■□□□□ 0.88
SMC4-221ENST00000489573 ARL4DP49703 201 aa20.53■□□□□ 0.88
SMC4-221ENST00000489573 CCL7P80098 99 aa20.53■□□□□ 0.88
SMC4-221ENST00000489573 SNAP47Q5SQN1 464 aa20.53■□□□□ 0.88
SMC4-221ENST00000489573 NDUFAF5Q5TEU4 345 aa20.53■□□□□ 0.88
SMC4-221ENST00000489573 C6orf163Q5TEZ5 329 aa20.53■□□□□ 0.88
SMC4-221ENST00000489573 NANOGP8Q6NSW7 305 aa20.53■□□□□ 0.88
SMC4-221ENST00000489573 NET1Q7Z628 596 aaPredicted RBP20.53■□□□□ 0.88
SMC4-221ENST00000489573 KMT5CQ86Y97 462 aa20.53■□□□□ 0.88
SMC4-221ENST00000489573 IFI44Q8TCB0 444 aa20.53■□□□□ 0.88
SMC4-221ENST00000489573 TMEM125Q96AQ2 219 aa20.53■□□□□ 0.88
SMC4-221ENST00000489573 MIEF2Q96C03 454 aa20.53■□□□□ 0.88
SMC4-221ENST00000489573 NANOGQ9H9S0 305 aa20.53■□□□□ 0.88
SMC4-221ENST00000489573 CMTM6Q9NX76 183 aa20.53■□□□□ 0.88
SMC4-221ENST00000489573 VAPAQ9P0L0 249 aa20.53■□□□□ 0.88
SMC4-221ENST00000489573 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.53■□□□□ 0.88
SMC4-221ENST00000489573 FBXW2Q9UKT8 454 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms