RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 RTL3Q8N8U3 475 aaKnown RBP6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 ZDHHC22Q8N966 263 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 SNX31Q8N9S9 440 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 ZNF511Q8NB15 262 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 ACVR1CQ8NER5 493 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 FAM172AQ8WUF8 416 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 PIH1D2Q8WWB5 315 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 FAM168AQ92567 244 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 PGM2Q96G03 612 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 TMEM109Q9BVC6 243 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 CINPQ9BW66 212 aaPredicted RBP6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 TMEM51Q9NW97 253 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 DNPEPQ9ULA0 475 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 STAP1Q9ULZ2 295 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 SHOC2Q9UQ13 582 aa6.87□□□□□ -1.31
EXOSC3-206ENST00000489414 FITM1A5D6W6 292 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 LRRC14BA6NHZ5 514 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 C3orf70A6NLC5 250 aaPredicted RBP6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 A8MXE2 369 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 AHRRA9YTQ3 701 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 H7C0C1 242 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 KPNA5O15131 536 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 FRS3O43559 492 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 HCN1O60741 890 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 MTX2O75431 263 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 CDK14O94921 469 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 TTC4O95801 387 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 APEHP13798 732 aaKnown RBP6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 UGT2B7P16662 529 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 IL1R2P27930 398 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 PHBP35232 272 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 ARL4AP40617 200 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 ATP5OP48047 213 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 SPINT3P49223 89 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 ARL4CP56559 192 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 UBA52P62987 128 aaKnown RBP6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 IL13RA1P78552 427 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 NFE2L1Q14494 772 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 OASLQ15646 514 aaKnown RBP6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 ZSCAN26Q16670 478 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 C15orf59Q2T9L4 293 aaPredicted RBP6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 BEX5Q5H9J7 111 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 ERMARDQ5T6L9 678 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 NDUFAF5Q5TEU4 345 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 SAMD5Q5TGI4 173 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 NSUN5P2Q63ZY6 315 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 ADAM5Q6NVV9 412 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 PRMT9Q6P2P2 845 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 DARS2Q6PI48 645 aaKnown RBP6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 PPP1R21Q6ZMI0 780 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 RINLQ6ZS11 566 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 C22orf34Q6ZV56 151 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 CENPUQ71F23 418 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 BZW1Q7L1Q6 419 aaKnown RBP6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 BNIPLQ7Z465 357 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 CPEB2Q7Z5Q1 589 aaKnown RBP6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 AMZ2Q86W34 360 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 SLC26A11Q86WA9 606 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 FAM131BQ86XD5 332 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 TRAPPC5Q8IUR0 188 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 PSTKQ8IV42 348 aaKnown RBP6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 PPIL6Q8IXY8 311 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 TMEM251Q8N6I4 163 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 OR2W6PQ8NHA6 318 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 SLC35B2Q8TB61 432 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 ACTL9Q8TC94 416 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 TBC1D31Q96DN5 1066 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 ZC3HAV1LQ96H79 300 aaKnown RBP6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 SPATA13Q96N96 652 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 SERPINB12Q96P63 405 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 FAM118BQ9BPY3 351 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 ZNF670Q9BS34 389 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 SOX7Q9BT81 388 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 RAB11FIP5Q9BXF6 653 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 TGIF2Q9GZN2 237 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 CDC42EP4Q9H3Q1 356 aaKnown RBP6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 FAM83DQ9H4H8 585 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 PPCSQ9HAB8 311 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 COLEC10Q9Y6Z7 277 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 PRR14LQ5THK1 2151 aa6.86□□□□□ -1.31
EXOSC3-206ENST00000489414 A0A087WUV0 522 aaPredicted RBP6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 PABPN1LA6NDY0 278 aaKnown RBP6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 SMIM23A6NLE4 172 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 FFAR3O14843 346 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 EIF3HO15372 352 aaKnown RBP eCLIP6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 GPR42O15529 346 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 KLF4O43474 513 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 STK10O94804 968 aaKnown RBP6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 CLDN7O95471 211 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 ACSL3O95573 720 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 ABHD2P08910 425 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 RBP3P10745 1247 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 FBLP22087 321 aaKnown RBP6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 IVDP26440 423 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 PTPN6P29350 595 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 CPOXP36551 454 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 NR2C2P49116 596 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 TAS2R50P59544 299 aa6.85□□□□□ -1.31
EXOSC3-206ENST00000489414 MAGOHP61326 146 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms