RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 KLK8O60259 260 aa23.42■■□□□ 1.34
HMGN1-217ENST00000489072 INHBAP08476 426 aa23.42■■□□□ 1.34
HMGN1-217ENST00000489072 RNF224P0DH78 156 aa23.42■■□□□ 1.34
HMGN1-217ENST00000489072 CERS1P27544 350 aa23.42■■□□□ 1.34
HMGN1-217ENST00000489072 ST13P50502 369 aaKnown RBP23.42■■□□□ 1.34
HMGN1-217ENST00000489072 RAB38P57729 211 aa23.42■■□□□ 1.34
HMGN1-217ENST00000489072 NAA30Q147X3 362 aaPredicted RBP23.42■■□□□ 1.34
HMGN1-217ENST00000489072 PFKFB4Q16877 469 aa23.42■■□□□ 1.34
HMGN1-217ENST00000489072 UBE3DQ7Z6J8 389 aa23.42■■□□□ 1.34
HMGN1-217ENST00000489072 SCUBE1Q8IWY4 988 aa23.42■■□□□ 1.34
HMGN1-217ENST00000489072 LAS2Q8IYD9 372 aa23.42■■□□□ 1.34
HMGN1-217ENST00000489072 KIF2BQ8N4N8 673 aa23.42■■□□□ 1.34
HMGN1-217ENST00000489072 TEX9Q8N6V9 391 aa23.42■■□□□ 1.34
HMGN1-217ENST00000489072 ELP5Q8TE02 316 aa23.42■■□□□ 1.34
HMGN1-217ENST00000489072 ZNF473Q8WTR7 871 aaKnown RBP23.42■■□□□ 1.34
HMGN1-217ENST00000489072 PSMG3-AS1Q96PY0 264 aa23.42■■□□□ 1.34
HMGN1-217ENST00000489072 MS4A8Q9BY19 250 aa23.42■■□□□ 1.34
HMGN1-217ENST00000489072 PRDM7Q9NQW5 492 aa23.42■■□□□ 1.34
HMGN1-217ENST00000489072 ZNF358Q9NW07 568 aa23.42■■□□□ 1.34
HMGN1-217ENST00000489072 MMACHCQ9Y4U1 282 aa23.42■■□□□ 1.34
HMGN1-217ENST00000489072 CLDN16Q9Y5I7 305 aa23.42■■□□□ 1.34
HMGN1-217ENST00000489072 MAST4O15021 2626 aa23.42■■□□□ 1.34
HMGN1-217ENST00000489072 BLACEA4D250 179 aa23.41■■□□□ 1.34
HMGN1-217ENST00000489072 SAGE2PA6NJ88 616 aa23.41■■□□□ 1.34
HMGN1-217ENST00000489072 TGFBR3LH3BV60 316 aa23.41■■□□□ 1.34
HMGN1-217ENST00000489072 GFAPP14136 432 aa23.41■■□□□ 1.34
HMGN1-217ENST00000489072 EPB42P16452 691 aa23.41■■□□□ 1.34
HMGN1-217ENST00000489072 HPDP32754 393 aaPredicted RBP23.41■■□□□ 1.34
HMGN1-217ENST00000489072 TECRLQ5HYJ1 363 aa23.41■■□□□ 1.34
HMGN1-217ENST00000489072 MED27Q6P2C8 311 aa23.41■■□□□ 1.34
HMGN1-217ENST00000489072 FAM180AQ6UWF9 173 aa23.41■■□□□ 1.34
HMGN1-217ENST00000489072 CEP112Q8N8E3 955 aa23.41■■□□□ 1.34
HMGN1-217ENST00000489072 FAM47BQ8NA70 645 aa23.41■■□□□ 1.34
HMGN1-217ENST00000489072 ST6GALNAC3Q8NDV1 305 aa23.41■■□□□ 1.34
HMGN1-217ENST00000489072 NFAM1Q8NET5 270 aaPredicted RBP23.41■■□□□ 1.34
HMGN1-217ENST00000489072 DCAKDQ8WVC6 231 aa23.41■■□□□ 1.34
HMGN1-217ENST00000489072 SERINC2Q96SA4 455 aa23.41■■□□□ 1.34
HMGN1-217ENST00000489072 NFU1Q9UMS0 254 aa23.41■■□□□ 1.34
HMGN1-217ENST00000489072 A0A088AWK7 358 aa23.4■■□□□ 1.34
HMGN1-217ENST00000489072 A8MUA0 341 aa23.4■■□□□ 1.34
HMGN1-217ENST00000489072 PCNAP12004 261 aa23.4■■□□□ 1.34
HMGN1-217ENST00000489072 ZNF10P21506 573 aaPredicted RBP23.4■■□□□ 1.34
HMGN1-217ENST00000489072 ALDH18A1P54886 795 aaKnown RBP23.4■■□□□ 1.34
HMGN1-217ENST00000489072 MTTPP55157 894 aa23.4■■□□□ 1.34
HMGN1-217ENST00000489072 LIM2P55344 173 aa23.4■■□□□ 1.34
HMGN1-217ENST00000489072 MEP1AQ16819 746 aa23.4■■□□□ 1.34
HMGN1-217ENST00000489072 ZNF324BQ6AW86 544 aaPredicted RBP23.4■■□□□ 1.34
HMGN1-217ENST00000489072 GRHL2Q6ISB3 625 aa23.4■■□□□ 1.34
HMGN1-217ENST00000489072 KLC3Q6P597 504 aa23.4■■□□□ 1.34
HMGN1-217ENST00000489072 ZNF793Q6ZN11 406 aa23.4■■□□□ 1.34
HMGN1-217ENST00000489072 OR7G3Q8NG95 312 aa23.4■■□□□ 1.34
HMGN1-217ENST00000489072 UBE2E3Q969T4 207 aa23.4■■□□□ 1.34
HMGN1-217ENST00000489072 CSF3RQ99062 836 aa23.4■■□□□ 1.34
HMGN1-217ENST00000489072 CPSF2Q9P2I0 782 aaKnown RBP23.4■■□□□ 1.34
HMGN1-217ENST00000489072 NAV2Q8IVL1 2488 aa23.39■■□□□ 1.34
HMGN1-217ENST00000489072 POC1B-GALNT4F8VUJ3 575 aa23.39■■□□□ 1.33
HMGN1-217ENST00000489072 CYR61O00622 381 aa23.39■■□□□ 1.33
HMGN1-217ENST00000489072 PRAMEF2O60811 474 aa23.39■■□□□ 1.33
HMGN1-217ENST00000489072 SH3BGRLO75368 114 aa23.39■■□□□ 1.33
HMGN1-217ENST00000489072 SERPINB9P50453 376 aa23.39■■□□□ 1.33
HMGN1-217ENST00000489072 TUBA3CQ13748 450 aa23.39■■□□□ 1.33
HMGN1-217ENST00000489072 PCBP2Q15366 365 aaKnown RBP eCLIP23.39■■□□□ 1.33
HMGN1-217ENST00000489072 TUBA3EQ6PEY2 450 aa23.39■■□□□ 1.33
HMGN1-217ENST00000489072 RNF175Q8N4F7 328 aa23.39■■□□□ 1.33
HMGN1-217ENST00000489072 BCORP1Q8N888 145 aa23.39■■□□□ 1.33
HMGN1-217ENST00000489072 ARMC2Q8NEN0 867 aa23.39■■□□□ 1.33
HMGN1-217ENST00000489072 SLX1AQ9BQ83 275 aa23.39■■□□□ 1.33
HMGN1-217ENST00000489072 COPS7BQ9H9Q2 264 aaPredicted RBP23.39■■□□□ 1.33
HMGN1-217ENST00000489072 PRTFDC1Q9NRG1 225 aa23.39■■□□□ 1.33
HMGN1-217ENST00000489072 DAPP1Q9UN19 280 aa23.39■■□□□ 1.33
HMGN1-217ENST00000489072 ANGPTL3Q9Y5C1 460 aa23.39■■□□□ 1.33
HMGN1-217ENST00000489072 IKBKGQ9Y6K9 419 aa23.39■■□□□ 1.33
HMGN1-217ENST00000489072 DIDO1Q9BTC0 2240 aaKnown RBP23.39■■□□□ 1.33
HMGN1-217ENST00000489072 A0A087WUV0 522 aaPredicted RBP23.38■■□□□ 1.33
HMGN1-217ENST00000489072 RTCAO00442 366 aaKnown RBP23.38■■□□□ 1.33
HMGN1-217ENST00000489072 SIX3O95343 332 aaPredicted RBP23.38■■□□□ 1.33
HMGN1-217ENST00000489072 TGFB1P01137 390 aa23.38■■□□□ 1.33
HMGN1-217ENST00000489072 EDN3P14138 238 aa23.38■■□□□ 1.33
HMGN1-217ENST00000489072 PPP2R1BP30154 601 aa23.38■■□□□ 1.33
HMGN1-217ENST00000489072 HSD17B7P56937 341 aa23.38■■□□□ 1.33
HMGN1-217ENST00000489072 TGM3Q08188 693 aa23.38■■□□□ 1.33
HMGN1-217ENST00000489072 ELOAQ14241 798 aaKnown RBP23.38■■□□□ 1.33
HMGN1-217ENST00000489072 INAQ16352 499 aa23.38■■□□□ 1.33
HMGN1-217ENST00000489072 SLC5A8Q8N695 610 aa23.38■■□□□ 1.33
HMGN1-217ENST00000489072 ADAMTS18Q8TE60 1221 aa23.38■■□□□ 1.33
HMGN1-217ENST00000489072 SIGLEC12Q96PQ1 595 aa23.38■■□□□ 1.33
HMGN1-217ENST00000489072 KCNC2Q96PR1 638 aa23.38■■□□□ 1.33
HMGN1-217ENST00000489072 CDCP1Q9H5V8 836 aa23.38■■□□□ 1.33
HMGN1-217ENST00000489072 OLAHQ9NV23 265 aa23.38■■□□□ 1.33
HMGN1-217ENST00000489072 ANKRD10Q9NXR5 420 aa23.38■■□□□ 1.33
HMGN1-217ENST00000489072 KCMF1Q9P0J7 381 aa23.38■■□□□ 1.33
HMGN1-217ENST00000489072 ZNF180Q9UJW8 692 aa23.38■■□□□ 1.33
HMGN1-217ENST00000489072 TRIM49D1C9J1S8 452 aa23.37■■□□□ 1.33
HMGN1-217ENST00000489072 ATP5A1P25705 553 aaKnown RBP23.37■■□□□ 1.33
HMGN1-217ENST00000489072 CD96P40200 585 aa23.37■■□□□ 1.33
HMGN1-217ENST00000489072 TAS2R50P59544 299 aa23.37■■□□□ 1.33
HMGN1-217ENST00000489072 TAOK1Q7L7X3 1001 aa23.37■■□□□ 1.33
HMGN1-217ENST00000489072 GOLGA7Q7Z5G4 137 aa23.37■■□□□ 1.33
HMGN1-217ENST00000489072 ZNF595Q8IYB9 648 aa23.37■■□□□ 1.33
HMGN1-217ENST00000489072 MDS2Q8NDY4 140 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms