RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 COL9A2Q14055 689 aaPredicted RBP15.09■□□□□ 0.01
HDAC7-224ENST00000488927 ABRAXAS2Q15018 415 aa15.09■□□□□ 0.01
HDAC7-224ENST00000488927 UGT8Q16880 541 aa15.09■□□□□ 0.01
HDAC7-224ENST00000488927 TCHHL1Q5QJ38 904 aaPredicted RBP15.09■□□□□ 0.01
HDAC7-224ENST00000488927 SH2D4BQ5SQS7 431 aa15.09■□□□□ 0.01
HDAC7-224ENST00000488927 KANK2Q63ZY3 851 aa15.09■□□□□ 0.01
HDAC7-224ENST00000488927 INO80CQ6PI98 192 aaPredicted RBP15.09■□□□□ 0.01
HDAC7-224ENST00000488927 MED25Q71SY5 747 aa15.09■□□□□ 0.01
HDAC7-224ENST00000488927 TRIM46Q7Z4K8 759 aa15.09■□□□□ 0.01
HDAC7-224ENST00000488927 RAB43Q86YS6 212 aa15.09■□□□□ 0.01
HDAC7-224ENST00000488927 ZC3H7AQ8IWR0 971 aaKnown RBP15.09■□□□□ 0.01
HDAC7-224ENST00000488927 CA13Q8N1Q1 262 aa15.09■□□□□ 0.01
HDAC7-224ENST00000488927 ZCCHC7Q8N3Z6 543 aaKnown RBP15.09■□□□□ 0.01
HDAC7-224ENST00000488927 RNF175Q8N4F7 328 aa15.09■□□□□ 0.01
HDAC7-224ENST00000488927 ACOT4Q8N9L9 421 aa15.09■□□□□ 0.01
HDAC7-224ENST00000488927 TBC1D20Q96BZ9 403 aa15.09■□□□□ 0.01
HDAC7-224ENST00000488927 SPSB2Q99619 263 aa15.09■□□□□ 0.01
HDAC7-224ENST00000488927 CCT7Q99832 543 aa15.09■□□□□ 0.01
HDAC7-224ENST00000488927 ILKAPQ9H0C8 392 aaPredicted RBP15.09■□□□□ 0.01
HDAC7-224ENST00000488927 DDX31Q9H8H2 851 aaKnown RBP15.09■□□□□ 0.01
HDAC7-224ENST00000488927 SEMA3GQ9NS98 782 aa15.09■□□□□ 0.01
HDAC7-224ENST00000488927 MS4A12Q9NXJ0 267 aa15.09■□□□□ 0.01
HDAC7-224ENST00000488927 MRPS33Q9Y291 106 aaKnown RBP15.09■□□□□ 0.01
HDAC7-224ENST00000488927 ANKRD11Q6UB99 2663 aaPredicted RBP15.08■□□□□ 0
HDAC7-224ENST00000488927 A0A0G2JN53 185 aa15.08■□□□□ 0
HDAC7-224ENST00000488927 BLACEA4D250 179 aa15.08■□□□□ 0
HDAC7-224ENST00000488927 SAP18O00422 153 aaKnown RBP15.08■□□□□ 0
HDAC7-224ENST00000488927 KLF11O14901 512 aa15.08■□□□□ 0
HDAC7-224ENST00000488927 CNOT3O75175 753 aaKnown RBP15.08■□□□□ 0
HDAC7-224ENST00000488927 ETHE1O95571 254 aa15.08■□□□□ 0
HDAC7-224ENST00000488927 NR1D1P20393 614 aa15.08■□□□□ 0
HDAC7-224ENST00000488927 CERS1P27544 350 aa15.08■□□□□ 0
HDAC7-224ENST00000488927 RPS18P62269 152 aaKnown RBP15.08■□□□□ 0
HDAC7-224ENST00000488927 KLC1Q07866 573 aa15.08■□□□□ 0
HDAC7-224ENST00000488927 SRSF6Q13247 344 aaKnown RBP15.08■□□□□ 0
HDAC7-224ENST00000488927 IMPG1Q17R60 797 aa15.08■□□□□ 0
HDAC7-224ENST00000488927 SYT16Q17RD7 645 aa15.08■□□□□ 0
HDAC7-224ENST00000488927 TUBB8Q3ZCM7 444 aa15.08■□□□□ 0
HDAC7-224ENST00000488927 SPIN4Q56A73 249 aa15.08■□□□□ 0
HDAC7-224ENST00000488927 VWA2Q5GFL6 755 aa15.08■□□□□ 0
HDAC7-224ENST00000488927 CLEC6AQ6EIG7 209 aa15.08■□□□□ 0
HDAC7-224ENST00000488927 METTL4Q8N3J2 472 aa15.08■□□□□ 0
HDAC7-224ENST00000488927 OR5T3Q8NGG3 340 aa15.08■□□□□ 0
HDAC7-224ENST00000488927 SNRNP27Q8WVK2 155 aaKnown RBP15.08■□□□□ 0
HDAC7-224ENST00000488927 THAP4Q8WY91 577 aa15.08■□□□□ 0
HDAC7-224ENST00000488927 PEX11GQ96HA9 241 aa15.08■□□□□ 0
HDAC7-224ENST00000488927 METTL2AQ96IZ6 378 aaKnown RBP15.08■□□□□ 0
HDAC7-224ENST00000488927 CATSPER2Q96P56 530 aa15.08■□□□□ 0
HDAC7-224ENST00000488927 CRB3Q9BUF7 120 aa15.08■□□□□ 0
HDAC7-224ENST00000488927 ACPTQ9BZG2 426 aa15.08■□□□□ 0
HDAC7-224ENST00000488927 SOX17Q9H6I2 414 aaPredicted RBP15.08■□□□□ 0
HDAC7-224ENST00000488927 MANSC1Q9H8J5 431 aa15.08■□□□□ 0
HDAC7-224ENST00000488927 THAP1Q9NVV9 213 aa15.08■□□□□ 0
HDAC7-224ENST00000488927 LYARQ9NX58 379 aaKnown RBP15.08■□□□□ 0
HDAC7-224ENST00000488927 DAPP1Q9UN19 280 aa15.08■□□□□ 0
HDAC7-224ENST00000488927 RAP2CQ9Y3L5 183 aa15.08■□□□□ 0
HDAC7-224ENST00000488927 MRPS18BQ9Y676 258 aaKnown RBP15.08■□□□□ 0
HDAC7-224ENST00000488927 ARHGAP10A1A4S6 786 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 SYNDIG1LA6NDD5 238 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 SLC28A1O00337 649 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 RTCAO00442 366 aaKnown RBP15.07■□□□□ 0
HDAC7-224ENST00000488927 RGS14O43566 566 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 RSL1D1O76021 490 aaKnown RBP15.07■□□□□ 0
HDAC7-224ENST00000488927 B3GALT4O96024 378 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 HEXBP07686 556 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 FHP07954 510 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 CHN1P15882 459 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 MMP11P24347 488 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 BSGP35613 385 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 HTR6P50406 440 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 LIM2P55344 173 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 RAB38P57729 211 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 OLR1P78380 273 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 BST1Q10588 318 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 CDC20Q12834 499 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 ERV3-1Q14264 604 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 CYP20A1Q6UW02 462 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 ZNF793Q6ZN11 406 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 ARFGAP2Q8N6H7 521 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 C7orf57Q8NEG2 295 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 DYDC1Q8WWB3 177 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 HBEGFQ99075 208 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 ZNF717Q9BY31 904 aaPredicted RBP15.07■□□□□ 0
HDAC7-224ENST00000488927 MRPL1Q9BYD6 325 aaKnown RBP15.07■□□□□ 0
HDAC7-224ENST00000488927 TNFRSF12AQ9NP84 129 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 INTS9Q9NV88 658 aaKnown RBP15.07■□□□□ 0
HDAC7-224ENST00000488927 PHF11Q9UIL8 331 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 HAO1Q9UJM8 370 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 C3orf18Q9UK00 162 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 MKL2Q9ULH7 1088 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 DNAJC15Q9Y5T4 150 aa15.07■□□□□ 0
HDAC7-224ENST00000488927 A0A0A6YYD5 115 aa15.06■□□□□ 0
HDAC7-224ENST00000488927 IDSB3KWA1 339 aa15.06■□□□□ 0
HDAC7-224ENST00000488927 CLDN4O14493 209 aa15.06■□□□□ 0
HDAC7-224ENST00000488927 GUCY1B2O75343 617 aa15.06■□□□□ 0
HDAC7-224ENST00000488927 UMODP07911 640 aa15.06■□□□□ 0
HDAC7-224ENST00000488927 WT1P19544 449 aaPredicted RBP15.06■□□□□ 0
HDAC7-224ENST00000488927 SERPINB3P29508 390 aa15.06■□□□□ 0
HDAC7-224ENST00000488927 TLX1P31314 330 aaPredicted RBP15.06■□□□□ 0
HDAC7-224ENST00000488927 ARRB2P32121 409 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms