RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, human

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-215	ENST00000488317	TRIP12	Q14669	1992 aa	Predicted RBP	4.25	□□□□□ -1.73
SRRM1-215	ENST00000488317	LTN1	O94822	1766 aa		4.25	□□□□□ -1.73
SRRM1-215	ENST00000488317	TTC21B	Q7Z4L5	1316 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	CRB1	P82279	1406 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	FAM172BP	A6NC97	362 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	KRT87P	A6NCN2	255 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	ANTXRL	A6NF34	631 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	SMIM1	B2RUZ4	78 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	C2CD4D	B7Z1M9	353 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317		M0R296	226 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	LMX1B	O60663	402 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	HSF2BP	O75031	334 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	GRAP2	O75791	330 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	YES1	P07947	543 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	FER	P16591	822 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	GAP43	P17677	238 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	ITGA3	P26006	1051 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	OR3A3	P47888	321 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	SLC12A3	P55017	1021 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	UBE2H	P62256	183 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	RPP38	P78345	283 aa	Known RBP	4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	PHEX	P78562	749 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	WASHC5	Q12768	1159 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	TRIM29	Q14134	588 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	SMC1A	Q14683	1233 aa	Known RBP	4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	KIAA1644	Q3SXP7	199 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	GTDC1	Q4AE62	458 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	PARP10	Q53GL7	1025 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	SLC35E4	Q6ICL7	350 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	TRMT1L	Q7Z2T5	733 aa	Known RBP	4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	ZNF410	Q86VK4	478 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	TDH	Q8IZJ6	230 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	ZNF619	Q8N2I2	560 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	PDCL2	Q8N4E4	241 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	LRRC8C	Q8TDW0	803 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	HPSE2	Q8WWQ2	592 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	EPSTI1	Q96J88	318 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	ZNF560	Q96MR9	790 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	RUNDC3B	Q96NL0	473 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	RUFY1	Q96T51	708 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	SPX	Q9BT56	116 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	FSD1	Q9BTV5	496 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	C5orf66	Q9H5L9	145 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	MRPL17	Q9NRX2	175 aa	Known RBP	4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	PNPLA3	Q9NST1	481 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	TMED7	Q9Y3B3	224 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	KIF3A	Q9Y496	699 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	SIPA1L3	O60292	1781 aa	Predicted RBP	4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	PCSK5	Q92824	1860 aa		4.24	□□□□□ -1.73
SRRM1-215	ENST00000488317	RAD50	Q92878	1312 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	PIK3C2A	O00443	1686 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	RGPD8	O14715	1765 aa	Predicted RBP	4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	SLIT1	O75093	1534 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	CCDC162P	A2VCL2	907 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317		A8MVM7	634 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	KLF11	O14901	512 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	KIF5C	O60282	957 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	ATP6V1G1	O75348	118 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	SEC22B	O75396	215 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	GMNN	O75496	209 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	PRDM1	O75626	825 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	TRMU	O75648	421 aa	Known RBP	4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	KRT36	O76013	467 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	CD59	P13987	128 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	TYMP	P19971	482 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	MX1	P20591	662 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	MAGEA11	P43364	429 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	RPL36A	P83881	106 aa	Known RBP	4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	SLC3A1	Q07837	685 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	SGCG	Q13326	291 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	PDE7A	Q13946	482 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	PPA1	Q15181	289 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	STXBP2	Q15833	593 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	EXT1	Q16394	746 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	XKR6	Q5GH73	641 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	OR4C11	Q6IEV9	310 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	KIAA1161	Q6NSJ0	714 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	CEACAM20	Q6UY09	585 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	LAX1	Q8IWV1	398 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	ANKRD7	Q92527	254 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	SEPT8	Q92599	483 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	GGH	Q92820	318 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	ULK4	Q96C45	1275 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	NXPE2	Q96DL1	559 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	GIMAP5	Q96F15	307 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	SENP5	Q96HI0	755 aa	Predicted RBP	4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	COG3	Q96JB2	828 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	SPATA13	Q96N96	652 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	NAP1L3	Q99457	506 aa	Predicted RBP	4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	LPAR4	Q99677	370 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	DDX50	Q9BQ39	737 aa	Known RBP	4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	PITPNM3	Q9BZ71	974 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	LRRCC1	Q9C099	1032 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	MTIF3	Q9H2K0	278 aa	Known RBP	4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	MAGEF1	Q9HAY2	307 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	ZCCHC3	Q9NUD5	404 aa	Known RBP	4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	EXOC1	Q9NV70	894 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	TBC1D13	Q9NVG8	400 aa		4.23	□□□□□ -1.73
SRRM1-215	ENST00000488317	INTS10	Q9NVR2	710 aa	Known RBP	4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms