RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 UBXN8O00124 270 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 B3GALT2O43825 422 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 SUPT3HO75486 399 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 CLEC3AO75596 197 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 NEURL1O76050 574 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 TBX6O95947 436 aaPredicted RBP10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 SP1P08047 785 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 TFEBP19484 476 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 CD22P20273 847 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 CERS1P27544 350 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 SPRP35270 261 aaPredicted RBP10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 RAB38P57729 211 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 ATP6V0D1P61421 351 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 ETF1P62495 437 aaKnown RBP10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 IRF8Q02556 426 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 SLC13A2Q13183 592 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 CBLBQ13191 982 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 CHIT1Q13231 466 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 PDK4Q16654 411 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 GRTP1Q5TC63 336 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 SLC25A25Q6KCM7 469 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 TRIM40Q6P9F5 258 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 TCAIMQ8N3R3 496 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 TMEM178AQ8NBL3 297 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 NFAM1Q8NET5 270 aaPredicted RBP10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 TTLQ8NG68 377 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 KIAA1191Q96A73 305 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 SCMH1Q96GD3 660 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 CSF3RQ99062 836 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 CAPS2Q9BXY5 557 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 REXO4Q9GZR2 422 aaKnown RBP10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 RAB17Q9H0T7 212 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 COPS7BQ9H9Q2 264 aaPredicted RBP10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 LIN28AQ9H9Z2 209 aaKnown RBP10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 GPRC5BQ9NZH0 403 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 PTBP2Q9UKA9 531 aaKnown RBP10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 ARHGAP21Q5T5U3 1957 aa10.57□□□□□ -0.72
NIPAL3-207ENST00000488155 RTCAO00442 366 aaKnown RBP10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 SLC25A12O75746 678 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 PCNAP12004 261 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 GGT5P36269 586 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 RFC3P40938 356 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 MSH2P43246 934 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 CYB561P49447 251 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 MLF1P58340 268 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 HSF1Q00613 529 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 RBPJQ06330 500 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 BMPR2Q13873 1038 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 ZKSCAN8Q15776 578 aaPredicted RBP10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 UAP1Q16222 522 aaPredicted RBP10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 C3AR1Q16581 482 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 C16orf47Q6ZP98 133 aaPredicted RBP10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 ISCA2Q86U28 154 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 RNF175Q8N4F7 328 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 CPSF7Q8N684 471 aaKnown RBP10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 FAM98AQ8NCA5 519 aaKnown RBP10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 PDPRQ8NCN5 879 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 OR2L5Q8NG80 312 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 NCLNQ969V3 563 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 RELTQ969Z4 430 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 NXNL1Q96CM4 212 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 PTCD3Q96EY7 689 aaKnown RBP10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 CCDC120Q96HB5 630 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 UBXN10Q96LJ8 280 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 QRFPRQ96P65 431 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 NT5DC2Q9H857 520 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 CLK4Q9HAZ1 481 aaKnown RBP10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 COPG2Q9UBF2 871 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 SUCOQ9UBS9 1254 aaKnown RBP10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 TINAGQ9UJW2 476 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 MMACHCQ9Y4U1 282 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 HCFC1P51610 2035 aa10.56□□□□□ -0.72
NIPAL3-207ENST00000488155 MPDZO75970 2070 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 A0A088AWK7 358 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 SAP18O00422 153 aaKnown RBP10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 PRKNO60260 465 aaPredicted RBP10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 TGFB1P01137 390 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 IFNA16P05015 189 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 GSTA2P09210 222 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 SLC35E2BP0CK96 405 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 EPORP19235 508 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 ZNF10P21506 573 aaPredicted RBP10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 GRNP28799 593 aaKnown RBP10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 STX2P32856 288 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 CA7P43166 264 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 CLCN2P51788 898 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 LIM2P55344 173 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 IRF9Q00978 393 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 ID2Q02363 134 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 CAV1Q03135 178 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 DDX39BQ13838 428 aaKnown RBP10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 HIST2H2ACQ16777 129 aaPredicted RBP10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 RNFT1Q5M7Z0 435 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 UBAP2Q5T6F2 1119 aaKnown RBP10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 MROH9Q5TGP6 573 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 SP5Q6BEB4 398 aaPredicted RBP10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 HIST2H2AA3Q6FI13 130 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 ABHD17CQ6PCB6 329 aa10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 NCCRP1Q6ZVX7 275 aaPredicted RBP10.55□□□□□ -0.72
NIPAL3-207ENST00000488155 CYS1Q717R9 158 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms