RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 TMED5Q9Y3A6 229 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 ATP10DQ9P241 1426 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 UNC13BO14795 1591 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 CDC42BPGQ6DT37 1551 aa3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 INO80Q9ULG1 1556 aaPredicted RBP3.42□□□□□ -1.86
ECHDC1-217ENST00000488087 MADDQ8WXG6 1647 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 ADCY9O60503 1353 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 MEIOCA2RUB1 952 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 LRRD1A4D1F6 860 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 CTAGE15A4D2H0 777 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 OOEPA6NGQ2 149 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 CASTOR2A6NHX0 329 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 ANKRD65E5RJM6 399 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 FPGTO14772 594 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 SLC30A4O14863 429 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 EXTL3O43909 919 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 PFKFB2O60825 505 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 ATP6AP2O75787 350 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 CDK2AP2O75956 126 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 ATP6V1G2O95670 118 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 PAEPP09466 180 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 TOP1P11387 765 aaKnown RBP3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 CPA3P15088 417 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 RANBP1P43487 201 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 MTCP1P56278 107 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 CLDN15P56746 228 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 VSNL1P62760 191 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 GNGT1P63211 74 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 PMP22Q01453 160 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 AKAP17AQ02040 695 aaKnown RBP3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 SULT2A1Q06520 285 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 TRAP1Q12931 704 aaKnown RBP3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 TNK1Q13470 666 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 PPA1Q15181 289 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 PTGISQ16647 500 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 MRGPRG-AS1Q2M3A8 158 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 ODF2Q5BJF6 829 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 ANKRD20A8PQ5CZ79 823 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 NHSL2Q5HYW2 709 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 TXNRD3NBQ6F5E7 133 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 GALNT17Q6IS24 598 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 UGT3A1Q6NUS8 523 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 ALKBH5Q6P6C2 394 aaKnown RBP3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 PSRC1Q6PGN9 363 aaPredicted RBP3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 NOTCH2NLQ7Z3S9 236 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 NRARPQ7Z6K4 114 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 CTAGE6Q86UF2 777 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 LRRC49Q8IUZ0 686 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 LACC1Q8IV20 430 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 VSTM4Q8IW00 320 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 CCDC83Q8IWF9 413 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 LSMEM2Q8N112 164 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 ZNF619Q8N2I2 560 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 ARFGAP2Q8N6H7 521 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 TMCO5AQ8N6Q1 288 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 WDSUB1Q8N9V3 476 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 CCDC148Q8NFR7 591 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 SPATA3Q8NHX4 192 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 OCC1Q8TAD7 63 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 HEXDCQ8WVB3 486 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 TSACCQ96A04 125 aaPredicted RBP3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 OPTNQ96CV9 577 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 PGM2Q96G03 612 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 ART5Q96L15 291 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 TSGA13Q96PP4 275 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 NUP58Q9BVL2 599 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 LRRCC1Q9C099 1032 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 VCX3BQ9H321 246 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 VCX3AQ9NNX9 186 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 ATAD3AQ9NVI7 634 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 CACNG5Q9UF02 275 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 MAN1B1Q9UKM7 699 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 ITGA11Q9UKX5 1188 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 CFAP45Q9UL16 551 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 PYGO1Q9Y3Y4 419 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 LRRC42Q9Y546 428 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 BCL9O00512 1426 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 GLI2P10070 1586 aa3.41□□□□□ -1.86
ECHDC1-217ENST00000488087 GOLGA6L4A6NEF3 574 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 C5orf52A6NGY3 159 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 YDJCA8MPS7 323 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 NR5A2O00482 541 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 ZNF195O14628 629 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 SETD1AO15047 1707 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 PPIP5K2O43314 1243 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 ATP6V1G1O75348 118 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 FLOT1O75955 427 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 ZFYVE9O95405 1425 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 ANP32DO95626 131 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 BAG2O95816 211 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 RLN1P04808 185 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 SUPT20HL2P0C7V6 817 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 STAG3L1P0CL83 205 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 STIP1P31948 543 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 KIF5BP33176 963 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 CCT6AP40227 531 aaKnown RBP3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 CETN2P41208 172 aa3.4□□□□□ -1.87
ECHDC1-217ENST00000488087 HNF4AP41235 474 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms