RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 ZNF559Q9BR84 538 aa3.2□□□□□ -1.9
HMGB1P36-201ENST00000487709 PAPOLGQ9BWT3 736 aaKnown RBP3.2□□□□□ -1.9
HMGB1P36-201ENST00000487709 C5orf66Q9H5L9 145 aa3.2□□□□□ -1.9
HMGB1P36-201ENST00000487709 MARCH7Q9H992 704 aa3.2□□□□□ -1.9
HMGB1P36-201ENST00000487709 PANK3Q9H999 370 aa3.2□□□□□ -1.9
HMGB1P36-201ENST00000487709 BAIAP2L1Q9UHR4 511 aa3.2□□□□□ -1.9
HMGB1P36-201ENST00000487709 KCNK6Q9Y257 313 aa3.2□□□□□ -1.9
HMGB1P36-201ENST00000487709 MOB4Q9Y3A3 225 aa3.2□□□□□ -1.9
HMGB1P36-201ENST00000487709 TMED7Q9Y3B3 224 aa3.2□□□□□ -1.9
HMGB1P36-201ENST00000487709 HEG1Q9ULI3 1381 aa3.2□□□□□ -1.9
HMGB1P36-201ENST00000487709 ASB14A6NK59 587 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 ZNF732B4DXR9 585 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 K7EQD1 137 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 DDX39AO00148 427 aaKnown RBP3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 MAGEB2O15479 319 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 ACSL4O60488 711 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 HSF2BPO75031 334 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 ATP6V1G1O75348 118 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 FGF19O95750 216 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 ADORA3P0DMS8 318 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 VCLP18206 1134 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 ACKR3P25106 362 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 OAS2P29728 719 aaKnown RBP3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 PPP2R1AP30153 589 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 CAPGP40121 348 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 CASP3P42574 277 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 KIAA1024LP59773 190 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 NECTIN1Q15223 517 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 FAM189A2Q15884 450 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 C2CD6Q53TS8 623 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 SPANXN4Q5MJ08 99 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 C1orf189Q5VU69 101 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 KCTD11Q693B1 232 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 SNRNP48Q6IEG0 339 aaKnown RBP3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 ETFRF1Q6IPR1 90 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 TMEM64Q6YI46 380 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 CDHR3Q6ZTQ4 885 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 Q6ZVQ6 151 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 NLRP14Q86W24 1093 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 CATSPERDQ86XM0 798 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 CARNMT1Q8N4J0 409 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 SPATA18Q8TC71 538 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 SPPL2AQ8TCT8 520 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 PTP4A1Q93096 173 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 OVOL2Q9BRP0 275 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 CCM2Q9BSQ5 444 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 NMUR1Q9HB89 426 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 MIS18AQ9NYP9 233 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 ZNF510Q9Y2H8 683 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 ETV7Q9Y603 341 aa3.19□□□□□ -1.9
HMGB1P36-201ENST00000487709 H7C423 109 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 SIGLEC5O15389 551 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 SYT7O43581 403 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 IDH3BO43837 385 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 THEGLP0DJG4 465 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 EZRP15311 586 aaKnown RBP3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 ZNF18P17022 549 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 FCGR2BP31994 310 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 FCGR2CP31995 323 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 ALDH3B1P43353 468 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 MAGEB1P43366 347 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 SERPINH1P50454 418 aaKnown RBP3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 CLCN4P51793 760 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 NDST2P52849 883 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 MS4A2Q01362 244 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 RPA4Q13156 261 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 UPP1Q16831 310 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 TAF1BQ53T94 588 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 PLPP4Q5VZY2 271 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 TMEM270Q6UE05 265 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 SIGLEC15Q6ZMC9 328 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 C3P1Q6ZMU1 363 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 ZFAND4Q86XD8 727 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 RNF130Q86XS8 419 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 DND1Q8IYX4 353 aaKnown RBP3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 ICA1LQ8NDH6 482 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 OR6F1Q8NGZ6 308 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 NPRL2Q8WTW4 380 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 TCP11Q8WWU5 503 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 MOCOSQ96EN8 888 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 C5orf30Q96GV9 206 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 SLC45A3Q96JT2 553 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 GUCD1Q96NT3 240 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 ANKRD27Q96NW4 1050 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 FAM213AQ9BRX8 229 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 SYT11Q9BT88 431 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 TRIM15Q9C019 465 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 STRADBQ9C0K7 418 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 PNNQ9H307 717 aaKnown RBP3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 MAGEF1Q9HAY2 307 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 MRPL17Q9NRX2 175 aaKnown RBP3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 MED17Q9NVC6 651 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 PLEK2Q9NYT0 353 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 NUDT4Q9NZJ9 180 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 THEGQ9P2T0 379 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 MUTYHQ9UIF7 546 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 EXOC7Q9UPT5 735 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 SNX5Q9Y5X3 404 aa3.18□□□□□ -1.9
HMGB1P36-201ENST00000487709 PRSS21Q9Y6M0 314 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms