RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 BHLHB9Q6PI77 547 aa4.11□□□□□ -1.75
CNN3-206ENST00000487539 LCLAT1Q6UWP7 414 aa4.11□□□□□ -1.75
CNN3-206ENST00000487539 TMEM26Q6ZUK4 368 aa4.11□□□□□ -1.75
CNN3-206ENST00000487539 HSD11B1LQ7Z5J1 315 aa4.11□□□□□ -1.75
CNN3-206ENST00000487539 SETD3Q86TU7 594 aaPredicted RBP4.11□□□□□ -1.75
CNN3-206ENST00000487539 SLC9B2Q86UD5 537 aa4.11□□□□□ -1.75
CNN3-206ENST00000487539 C12orf56Q8IXR9 622 aa4.11□□□□□ -1.75
CNN3-206ENST00000487539 OR1L3Q8NH93 324 aa4.11□□□□□ -1.75
CNN3-206ENST00000487539 FAM71BQ8TC56 605 aa4.11□□□□□ -1.75
CNN3-206ENST00000487539 ZFPM2Q8WW38 1151 aa4.11□□□□□ -1.75
CNN3-206ENST00000487539 REXO5Q96IC2 774 aaKnown RBP4.11□□□□□ -1.75
CNN3-206ENST00000487539 AGAP4Q96P64 663 aa4.11□□□□□ -1.75
CNN3-206ENST00000487539 TP63Q9H3D4 680 aaPredicted RBP4.11□□□□□ -1.75
CNN3-206ENST00000487539 PLEKHF2Q9H8W4 249 aa4.11□□□□□ -1.75
CNN3-206ENST00000487539 PHPT1Q9NRX4 125 aaPredicted RBP4.11□□□□□ -1.75
CNN3-206ENST00000487539 LHX3Q9UBR4 397 aa4.11□□□□□ -1.75
CNN3-206ENST00000487539 CNOT8Q9UFF9 292 aaKnown RBP4.11□□□□□ -1.75
CNN3-206ENST00000487539 SLC12A6Q9UHW9 1150 aa4.11□□□□□ -1.75
CNN3-206ENST00000487539 FBXL4Q9UKA2 621 aa4.11□□□□□ -1.75
CNN3-206ENST00000487539 RNF6Q9Y252 685 aa4.11□□□□□ -1.75
CNN3-206ENST00000487539 NPIPA5E9PKD4 350 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 JCHAINP01591 159 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 ALDOAP04075 364 aaKnown RBP4.1□□□□□ -1.75
CNN3-206ENST00000487539 ATP1A1P05023 1023 aaKnown RBP4.1□□□□□ -1.75
CNN3-206ENST00000487539 VDRP11473 427 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 ACP5P13686 325 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 TRIM21P19474 475 aaKnown RBP4.1□□□□□ -1.75
CNN3-206ENST00000487539 CCR1P32246 355 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 LONP1P36776 959 aaKnown RBP4.1□□□□□ -1.75
CNN3-206ENST00000487539 HTR3AP46098 478 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 RPL34P49207 117 aaKnown RBP4.1□□□□□ -1.75
CNN3-206ENST00000487539 GSDMDP57764 484 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 DCAF7P61962 342 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 DEFA6Q01524 100 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 RBPJQ06330 500 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 AIMP2Q13155 320 aaKnown RBP4.1□□□□□ -1.75
CNN3-206ENST00000487539 MFAP5Q13361 173 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 FHL1Q13642 323 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 BRD3Q15059 726 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 KRTAP27-1Q3LI81 207 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 RAB6CQ53S08 254 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 ZNF569Q5MCW4 686 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 C1orf189Q5VU69 101 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 SHEQ5VZ18 495 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 TMEM88Q6PEY1 159 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 RINLQ6ZS11 566 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 CPSF7Q8N684 471 aaKnown RBP4.1□□□□□ -1.75
CNN3-206ENST00000487539 NRACQ8N912 160 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 ZNF527Q8NB42 609 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 KIAA0895Q8NCT3 520 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 GOT1L1Q8NHS2 421 aaPredicted RBP4.1□□□□□ -1.75
CNN3-206ENST00000487539 PHF10Q8WUB8 498 aaKnown RBP4.1□□□□□ -1.75
CNN3-206ENST00000487539 PSMF1Q92530 271 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 THOC3Q96J01 351 aaKnown RBP4.1□□□□□ -1.75
CNN3-206ENST00000487539 HSFY1Q96LI6 401 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 LRFN5Q96NI6 719 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 GPR78Q96P69 363 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 NRTNQ99748 197 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 ABHD14AQ9BUJ0 271 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 HES7Q9BYE0 225 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 RAB6CQ9H0N0 254 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 MOV10Q9HCE1 1003 aaKnown RBP4.1□□□□□ -1.75
CNN3-206ENST00000487539 PIGVQ9NUD9 493 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 HEY2Q9UBP5 337 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 SLC23A2Q9UGH3 650 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 CD84Q9UIB8 345 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 CDC23Q9UJX2 597 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 NPIPA1Q9UND3 350 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 MFHAS1Q9Y4C4 1052 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 TENM1Q9UKZ4 2725 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 DNAJC13O75165 2243 aa4.1□□□□□ -1.75
CNN3-206ENST00000487539 IGLV3-10A0A075B6K4 115 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 LOC105369274A0A096LPK9 316 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 LOC102723532A0A0G2JNH3 316 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 FAM170AA1A519 330 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 DPPA5A6NC42 116 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 OR52A4PA6NMU1 304 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 A6NNC1 897 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 DNPH1O43598 174 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 HCRTR1O43613 425 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 ASNA1O43681 348 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 BUB1O43683 1085 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 SKAP2O75563 359 aaPredicted RBP4.09□□□□□ -1.75
CNN3-206ENST00000487539 MTA2O94776 668 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 WDPCPO95876 746 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 IFNA2P01563 188 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 RFPL3SP0C7P2 107 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 F3P13726 295 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 LHCGRP22888 699 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 AKT1P31749 480 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 GPD2P43304 727 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 CAPZBP47756 277 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 NR1H2P55055 460 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 RHOAP61586 193 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 YWHAZP63104 245 aaKnown RBP4.09□□□□□ -1.75
CNN3-206ENST00000487539 TUBB4BP68371 445 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 ARG2P78540 354 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 ACY1Q03154 408 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 LRMPQ12912 555 aa4.09□□□□□ -1.75
CNN3-206ENST00000487539 TUBB2AQ13885 445 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms