RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 CENPKQ9BS16 269 aa9.64□□□□□ -0.87
RNF220-215ENST00000487332 NTMT1Q9BV86 223 aa9.64□□□□□ -0.87
RNF220-215ENST00000487332 RBCK1Q9BYM8 510 aa9.64□□□□□ -0.87
RNF220-215ENST00000487332 DMRT3Q9NQL9 472 aa9.64□□□□□ -0.87
RNF220-215ENST00000487332 PRDM7Q9NQW5 492 aa9.64□□□□□ -0.87
RNF220-215ENST00000487332 RYDENQ9NUL5 291 aaKnown RBP9.64□□□□□ -0.87
RNF220-215ENST00000487332 PTGFRNQ9P2B2 879 aa9.64□□□□□ -0.87
RNF220-215ENST00000487332 CPSF2Q9P2I0 782 aaKnown RBP9.64□□□□□ -0.87
RNF220-215ENST00000487332 PCTPQ9UKL6 214 aa9.64□□□□□ -0.87
RNF220-215ENST00000487332 PLAAQ9Y263 795 aa9.64□□□□□ -0.87
RNF220-215ENST00000487332 TNRC6AQ8NDV7 1962 aaKnown RBP9.64□□□□□ -0.87
RNF220-215ENST00000487332 TRAV17A0A0B4J275 112 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 FOXE1O00358 373 aaPredicted RBP9.63□□□□□ -0.87
RNF220-215ENST00000487332 CYR61O00622 381 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 CLDN4O14493 209 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 DNAJB6O75190 326 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 VPS4BO75351 444 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 SEMA3DO95025 777 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 FAM153BP0C7A2 387 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 MYBL2P10244 700 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 SPTBP11277 2137 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 HIST1H1TP22492 207 aaPredicted RBP9.63□□□□□ -0.87
RNF220-215ENST00000487332 ATP5A1P25705 553 aaKnown RBP9.63□□□□□ -0.87
RNF220-215ENST00000487332 CERS1P27544 350 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 EEF1DP29692 281 aaKnown RBP9.63□□□□□ -0.87
RNF220-215ENST00000487332 TNFSF10P50591 281 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 TAS2R50P59544 299 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 TRAF3Q13114 568 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 CUL3Q13618 768 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 RUNX2Q13950 521 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 SLC29A2Q14542 456 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 FAM153CQ494X1 144 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 ABHD17BQ5VST6 288 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 ADNP2Q6IQ32 1131 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 ZNF793Q6ZN11 406 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 SHISA5Q8N114 240 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 TMEM151AQ8N4L1 468 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 SLC5A8Q8N695 610 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 LRRN4CLQ8ND94 238 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 HUS1BQ8NHY5 278 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 DNAJB14Q8TBM8 379 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 WDR20Q8TBZ3 569 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 ZNF483Q8TF39 744 aaPredicted RBP9.63□□□□□ -0.87
RNF220-215ENST00000487332 MZB1Q8WU39 189 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 SNRNP40Q96DI7 357 aaKnown RBP9.63□□□□□ -0.87
RNF220-215ENST00000487332 PTCHD1Q96NR3 888 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 CCDC77Q9BR77 488 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 MFRPQ9BY79 579 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 IPPKQ9H8X2 491 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 ACTR8Q9H981 624 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 ADAP2Q9NPF8 381 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 PRTFDC1Q9NRG1 225 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 ZNF358Q9NW07 568 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 MS4A12Q9NXJ0 267 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 ABI3Q9P2A4 366 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 VPS4AQ9UN37 437 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 STK38LQ9Y2H1 464 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 CLDN16Q9Y5I7 305 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 CSAG2Q9Y5P2 127 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 SPACA6W5XKT8 324 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 CPAMD8Q8IZJ3 1885 aa9.63□□□□□ -0.87
RNF220-215ENST00000487332 ZNF462Q96JM2 2506 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 ATRXP46100 2492 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 IGHV3-20A0A0C4DH32 117 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 OR5H15A6NDH6 313 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 A8MT66 165 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 OR7A17O14581 309 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 ZNF500O60304 480 aaPredicted RBP9.62□□□□□ -0.87
RNF220-215ENST00000487332 B4GALT2O60909 372 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 SIX3O95343 332 aaPredicted RBP9.62□□□□□ -0.87
RNF220-215ENST00000487332 CLDN9O95484 217 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 CELA2AP08217 269 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 SBK3P0C264 359 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 PCNAP12004 261 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 PTX3P26022 381 aaPredicted RBP9.62□□□□□ -0.87
RNF220-215ENST00000487332 PPP2R1BP30154 601 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 PLA2G16P53816 162 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 NAA20P61599 178 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 ARG2P78540 354 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 IGLV3-21P80748 117 aaPredicted RBP9.62□□□□□ -0.87
RNF220-215ENST00000487332 ACTN3Q08043 901 aaPredicted RBP9.62□□□□□ -0.87
RNF220-215ENST00000487332 BIKQ13323 160 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 SERTAD2Q14140 314 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 ELAVL1Q15717 326 aaKnown RBP9.62□□□□□ -0.87
RNF220-215ENST00000487332 IGFBP7Q16270 282 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 MEP1AQ16819 746 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 TEX35Q5T0J7 233 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 LINC00696Q6ZRV3 163 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 UBE3DQ7Z6J8 389 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 SIRT6Q8N6T7 355 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 NFAM1Q8NET5 270 aaPredicted RBP9.62□□□□□ -0.87
RNF220-215ENST00000487332 B3GNT7Q8NFL0 401 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 UHMK1Q8TAS1 419 aaKnown RBP9.62□□□□□ -0.87
RNF220-215ENST00000487332 F2RL3Q96RI0 385 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 TRIM45Q9H8W5 580 aaPredicted RBP9.62□□□□□ -0.87
RNF220-215ENST00000487332 KCNK13Q9HB14 408 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 ZBTB26Q9HCK0 441 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 NECTIN3Q9NQS3 549 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 AGPAT4Q9NRZ5 378 aa9.62□□□□□ -0.87
RNF220-215ENST00000487332 KCMF1Q9P0J7 381 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms