RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 TWIST2Q8WVJ9 160 aa18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 SLC45A3Q96JT2 553 aa18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 MAGEB18Q96M61 343 aa18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 CCNL2Q96S94 520 aaPredicted RBP18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 SPSB2Q99619 263 aa18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 TUBB1Q9H4B7 451 aa18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 SIRT5Q9NXA8 310 aa18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 TCFL5Q9UL49 500 aa18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 FIS1Q9Y3D6 152 aa18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 CCL27Q9Y4X3 112 aa18.32■□□□□ 0.52
PCOLCE-208ENST00000487172 ZNF860A6NHJ4 632 aa18.31■□□□□ 0.52
PCOLCE-208ENST00000487172 DNAJB6O75190 326 aa18.31■□□□□ 0.52
PCOLCE-208ENST00000487172 RSL1D1O76021 490 aaKnown RBP18.31■□□□□ 0.52
PCOLCE-208ENST00000487172 BMP10O95393 424 aa18.31■□□□□ 0.52
PCOLCE-208ENST00000487172 ZGLP1P0C6A0 271 aa18.31■□□□□ 0.52
PCOLCE-208ENST00000487172 CERS1P27544 350 aa18.31■□□□□ 0.52
PCOLCE-208ENST00000487172 SYT16Q17RD7 645 aa18.31■□□□□ 0.52
PCOLCE-208ENST00000487172 VWA2Q5GFL6 755 aa18.31■□□□□ 0.52
PCOLCE-208ENST00000487172 Q6ZSR9 355 aa18.31■□□□□ 0.52
PCOLCE-208ENST00000487172 PAGE2Q7Z2X7 111 aa18.31■□□□□ 0.52
PCOLCE-208ENST00000487172 NUDT13Q86X67 352 aa18.31■□□□□ 0.52
PCOLCE-208ENST00000487172 OR2Y1Q8NGV0 311 aa18.31■□□□□ 0.52
PCOLCE-208ENST00000487172 AGR3Q8TD06 166 aa18.31■□□□□ 0.52
PCOLCE-208ENST00000487172 LRRC8CQ8TDW0 803 aa18.31■□□□□ 0.52
PCOLCE-208ENST00000487172 MIEF2Q96C03 454 aa18.31■□□□□ 0.52
PCOLCE-208ENST00000487172 OR1F2PQ96R84 312 aa18.31■□□□□ 0.52
PCOLCE-208ENST00000487172 YIPF2Q9BWQ6 316 aa18.31■□□□□ 0.52
PCOLCE-208ENST00000487172 MRPL1Q9BYD6 325 aaKnown RBP18.31■□□□□ 0.52
PCOLCE-208ENST00000487172 LYRM4Q9HD34 91 aa18.31■□□□□ 0.52
PCOLCE-208ENST00000487172 PFDN4Q9NQP4 134 aa18.31■□□□□ 0.52
PCOLCE-208ENST00000487172 C14orf105Q9NVL8 296 aa18.31■□□□□ 0.52
PCOLCE-208ENST00000487172 HCN3Q9P1Z3 774 aa18.31■□□□□ 0.52
PCOLCE-208ENST00000487172 CTSFQ9UBX1 484 aa18.31■□□□□ 0.52
PCOLCE-208ENST00000487172 IL17BQ9UHF5 180 aa18.31■□□□□ 0.52
PCOLCE-208ENST00000487172 DAPP1Q9UN19 280 aa18.31■□□□□ 0.52
PCOLCE-208ENST00000487172 XCR1P46094 333 aa18.3■□□□□ 0.52
PCOLCE-208ENST00000487172 LIM2P55344 173 aa18.3■□□□□ 0.52
PCOLCE-208ENST00000487172 OLR1P78380 273 aa18.3■□□□□ 0.52
PCOLCE-208ENST00000487172 HMGCS1Q01581 520 aa18.3■□□□□ 0.52
PCOLCE-208ENST00000487172 IMPG1Q17R60 797 aa18.3■□□□□ 0.52
PCOLCE-208ENST00000487172 CRTC2Q53ET0 693 aaPredicted RBP18.3■□□□□ 0.52
PCOLCE-208ENST00000487172 SPIN4Q56A73 249 aa18.3■□□□□ 0.52
PCOLCE-208ENST00000487172 MRM1Q6IN84 353 aaKnown RBP18.3■□□□□ 0.52
PCOLCE-208ENST00000487172 RGS9BPQ6ZS82 235 aa18.3■□□□□ 0.52
PCOLCE-208ENST00000487172 VASH2Q86V25 355 aa18.3■□□□□ 0.52
PCOLCE-208ENST00000487172 ZC3H7AQ8IWR0 971 aaKnown RBP18.3■□□□□ 0.52
PCOLCE-208ENST00000487172 ADAMTS18Q8TE60 1221 aa18.3■□□□□ 0.52
PCOLCE-208ENST00000487172 TBC1D20Q96BZ9 403 aa18.3■□□□□ 0.52
PCOLCE-208ENST00000487172 C11orf24Q96F05 449 aaPredicted RBP18.3■□□□□ 0.52
PCOLCE-208ENST00000487172 PEX11GQ96HA9 241 aa18.3■□□□□ 0.52
PCOLCE-208ENST00000487172 DCBLD2Q96PD2 775 aa18.3■□□□□ 0.52
PCOLCE-208ENST00000487172 SORBS1Q9BX66 1292 aaKnown RBP18.3■□□□□ 0.52
PCOLCE-208ENST00000487172 KCMF1Q9P0J7 381 aa18.3■□□□□ 0.52
PCOLCE-208ENST00000487172 URB1O60287 2271 aaKnown RBP18.29■□□□□ 0.52
PCOLCE-208ENST00000487172 CCDC88CQ9P219 2028 aa18.29■□□□□ 0.52
PCOLCE-208ENST00000487172 A0A0A6YYD5 115 aa18.29■□□□□ 0.52
PCOLCE-208ENST00000487172 PIP5K1BO14986 540 aa18.29■□□□□ 0.52
PCOLCE-208ENST00000487172 EFSO43281 561 aa18.29■□□□□ 0.52
PCOLCE-208ENST00000487172 RGS14O43566 566 aa18.29■□□□□ 0.52
PCOLCE-208ENST00000487172 CREG1O75629 220 aa18.29■□□□□ 0.52
PCOLCE-208ENST00000487172 CYC1P08574 325 aa18.29■□□□□ 0.52
PCOLCE-208ENST00000487172 RNH1P13489 461 aaKnown RBP18.29■□□□□ 0.52
PCOLCE-208ENST00000487172 RAB38P57729 211 aa18.29■□□□□ 0.52
PCOLCE-208ENST00000487172 TLE3Q04726 772 aa18.29■□□□□ 0.52
PCOLCE-208ENST00000487172 SRSF6Q13247 344 aaKnown RBP18.29■□□□□ 0.52
PCOLCE-208ENST00000487172 SLAMF1Q13291 335 aa18.29■□□□□ 0.52
PCOLCE-208ENST00000487172 SSPNQ14714 243 aa18.29■□□□□ 0.52
PCOLCE-208ENST00000487172 BROXQ5VW32 411 aa18.29■□□□□ 0.52
PCOLCE-208ENST00000487172 GALNT18Q6P9A2 607 aa18.29■□□□□ 0.52
PCOLCE-208ENST00000487172 APIPQ96GX9 242 aa18.29■□□□□ 0.52
PCOLCE-208ENST00000487172 C7orf26Q96N11 449 aa18.29■□□□□ 0.52
PCOLCE-208ENST00000487172 ACTL8Q9H568 366 aa18.29■□□□□ 0.52
PCOLCE-208ENST00000487172 PNPOQ9NVS9 261 aa18.29■□□□□ 0.52
PCOLCE-208ENST00000487172 LYARQ9NX58 379 aaKnown RBP18.29■□□□□ 0.52
PCOLCE-208ENST00000487172 MS4A12Q9NXJ0 267 aa18.29■□□□□ 0.52
PCOLCE-208ENST00000487172 PTRH2Q9Y3E5 179 aaKnown RBP18.29■□□□□ 0.52
PCOLCE-208ENST00000487172 APC2O95996 2303 aa18.28■□□□□ 0.52
PCOLCE-208ENST00000487172 SLCO1B7G3V0H7 640 aa18.28■□□□□ 0.52
PCOLCE-208ENST00000487172 EEDO75530 441 aaKnown RBP18.28■□□□□ 0.52
PCOLCE-208ENST00000487172 FHP07954 510 aa18.28■□□□□ 0.52
PCOLCE-208ENST00000487172 LINC00032P0C843 101 aa18.28■□□□□ 0.52
PCOLCE-208ENST00000487172 TPP2P29144 1249 aaPredicted RBP18.28■□□□□ 0.52
PCOLCE-208ENST00000487172 FOLR3P41439 243 aa18.28■□□□□ 0.52
PCOLCE-208ENST00000487172 UCNP55089 124 aa18.28■□□□□ 0.52
PCOLCE-208ENST00000487172 MC1RQ01726 317 aa18.28■□□□□ 0.52
PCOLCE-208ENST00000487172 TUBB8Q3ZCM7 444 aa18.28■□□□□ 0.52
PCOLCE-208ENST00000487172 XKR7Q5GH72 579 aa18.28■□□□□ 0.52
PCOLCE-208ENST00000487172 COMMD6Q7Z4G1 85 aa18.28■□□□□ 0.52
PCOLCE-208ENST00000487172 DDIASQ8IXT1 998 aa18.28■□□□□ 0.52
PCOLCE-208ENST00000487172 C1orf52Q8N6N3 182 aaKnown RBP18.28■□□□□ 0.52
PCOLCE-208ENST00000487172 OR2T11Q8NH01 316 aa18.28■□□□□ 0.52
PCOLCE-208ENST00000487172 FAM76AQ8TAV0 307 aa18.28■□□□□ 0.52
PCOLCE-208ENST00000487172 STARD8Q92502 1023 aa18.28■□□□□ 0.52
PCOLCE-208ENST00000487172 NACC2Q96BF6 587 aa18.28■□□□□ 0.52
PCOLCE-208ENST00000487172 PHF11Q9UIL8 331 aa18.28■□□□□ 0.52
PCOLCE-208ENST00000487172 MCM8Q9UJA3 840 aa18.28■□□□□ 0.52
PCOLCE-208ENST00000487172 ASB4Q9Y574 426 aa18.28■□□□□ 0.52
PCOLCE-208ENST00000487172 PTGDR2Q9Y5Y4 395 aa18.28■□□□□ 0.52
PCOLCE-208ENST00000487172 MRPS18BQ9Y676 258 aaKnown RBP18.28■□□□□ 0.52
PCOLCE-208ENST00000487172 SPACA6W5XKT8 324 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms