RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 CD53P19397 219 aa13.81□□□□□ -0.2
PFDN4-204ENST00000487129 UQCRC1P31930 480 aa13.81□□□□□ -0.2
PFDN4-204ENST00000487129 PEX19P40855 299 aa13.81□□□□□ -0.2
PFDN4-204ENST00000487129 SOX3P41225 446 aa13.81□□□□□ -0.2
PFDN4-204ENST00000487129 TIAL1Q01085 375 aaKnown RBP eCLIP13.81□□□□□ -0.2
PFDN4-204ENST00000487129 NAE1Q13564 534 aa13.81□□□□□ -0.2
PFDN4-204ENST00000487129 KCTD19Q17RG1 926 aaPredicted RBP13.81□□□□□ -0.2
PFDN4-204ENST00000487129 NDUFAF5Q5TEU4 345 aa13.81□□□□□ -0.2
PFDN4-204ENST00000487129 NEPROQ6NW34 567 aa13.81□□□□□ -0.2
PFDN4-204ENST00000487129 CHSY3Q70JA7 882 aa13.81□□□□□ -0.2
PFDN4-204ENST00000487129 CXXC5Q7LFL8 322 aaKnown RBP13.81□□□□□ -0.2
PFDN4-204ENST00000487129 GPALPP1Q8IXQ4 340 aa13.81□□□□□ -0.2
PFDN4-204ENST00000487129 SPATA3Q8NHX4 192 aa13.81□□□□□ -0.2
PFDN4-204ENST00000487129 NCLNQ969V3 563 aa13.81□□□□□ -0.2
PFDN4-204ENST00000487129 VMP1Q96GC9 406 aa13.81□□□□□ -0.2
PFDN4-204ENST00000487129 RASL10BQ96S79 203 aa13.81□□□□□ -0.2
PFDN4-204ENST00000487129 GPR21Q99679 349 aa13.81□□□□□ -0.2
PFDN4-204ENST00000487129 AARSD1Q9BTE6 412 aaKnown RBP13.81□□□□□ -0.2
PFDN4-204ENST00000487129 REPIN1Q9BWE0 567 aaKnown RBP13.81□□□□□ -0.2
PFDN4-204ENST00000487129 TSGA10Q9BZW7 698 aa13.81□□□□□ -0.2
PFDN4-204ENST00000487129 CLK4Q9HAZ1 481 aaKnown RBP13.81□□□□□ -0.2
PFDN4-204ENST00000487129 IL1RL2Q9HB29 575 aa13.81□□□□□ -0.2
PFDN4-204ENST00000487129 HPF1Q9NWY4 346 aa13.81□□□□□ -0.2
PFDN4-204ENST00000487129 B4GALT7Q9UBV7 327 aa13.81□□□□□ -0.2
PFDN4-204ENST00000487129 ERVK-11Q9UQG0 969 aa13.81□□□□□ -0.2
PFDN4-204ENST00000487129 ZNF148Q9UQR1 794 aa13.81□□□□□ -0.2
PFDN4-204ENST00000487129 DRG1Q9Y295 367 aaKnown RBP13.81□□□□□ -0.2
PFDN4-204ENST00000487129 TCRBV7S3A2A0A539 114 aa13.8□□□□□ -0.2
PFDN4-204ENST00000487129 TRBC2A0A5B9 178 aa13.8□□□□□ -0.2
PFDN4-204ENST00000487129 KDM4EB2RXH2 506 aaPredicted RBP13.8□□□□□ -0.2
PFDN4-204ENST00000487129 OR1F1O43749 312 aa13.8□□□□□ -0.2
PFDN4-204ENST00000487129 RNH1P13489 461 aaKnown RBP13.8□□□□□ -0.2
PFDN4-204ENST00000487129 SCTRP47872 440 aa13.8□□□□□ -0.2
PFDN4-204ENST00000487129 KEAP1Q14145 624 aa13.8□□□□□ -0.2
PFDN4-204ENST00000487129 PHKG1Q16816 387 aa13.8□□□□□ -0.2
PFDN4-204ENST00000487129 ZNF750Q32MQ0 723 aa13.8□□□□□ -0.2
PFDN4-204ENST00000487129 ZNF470Q6ECI4 717 aa13.8□□□□□ -0.2
PFDN4-204ENST00000487129 IL20RBQ6UXL0 311 aa13.8□□□□□ -0.2
PFDN4-204ENST00000487129 GK5Q6ZS86 529 aa13.8□□□□□ -0.2
PFDN4-204ENST00000487129 CXorf67Q86X51 503 aaPredicted RBP13.8□□□□□ -0.2
PFDN4-204ENST00000487129 DENND6AQ8IWF6 608 aa13.8□□□□□ -0.2
PFDN4-204ENST00000487129 CA13Q8N1Q1 262 aa13.8□□□□□ -0.2
PFDN4-204ENST00000487129 CIARTQ8N365 385 aaPredicted RBP13.8□□□□□ -0.2
PFDN4-204ENST00000487129 ANKRD53Q8N9V6 530 aa13.8□□□□□ -0.2
PFDN4-204ENST00000487129 TMEM52Q8NDY8 209 aa13.8□□□□□ -0.2
PFDN4-204ENST00000487129 SCYL1Q96KG9 808 aa13.8□□□□□ -0.2
PFDN4-204ENST00000487129 COX4I2Q96KJ9 171 aa13.8□□□□□ -0.2
PFDN4-204ENST00000487129 FAM173AQ9BQD7 235 aa13.8□□□□□ -0.2
PFDN4-204ENST00000487129 FRMD8P1Q9BZ68 369 aaPredicted RBP13.8□□□□□ -0.2
PFDN4-204ENST00000487129 SEMA4BQ9NPR2 832 aaPredicted RBP13.8□□□□□ -0.2
PFDN4-204ENST00000487129 MYOTQ9UBF9 498 aa13.8□□□□□ -0.2
PFDN4-204ENST00000487129 VPS9D1Q9Y2B5 631 aa13.8□□□□□ -0.2
PFDN4-204ENST00000487129 RTTNQ86VV8 2226 aa13.8□□□□□ -0.2
PFDN4-204ENST00000487129 PFDN6O15212 129 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 CNR1P21554 472 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 TACR1P25103 407 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 GRK3P35626 688 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 DNASE1L1P49184 302 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 ASCL1P50553 236 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 CCR8P51685 355 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 HNRNPFP52597 415 aaKnown RBP13.79□□□□□ -0.2
PFDN4-204ENST00000487129 RAB8AP61006 207 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 DCAF7P61962 342 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 SKP1P63208 163 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 CTBP1Q13363 440 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 SNX1Q13596 522 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 SIX1Q15475 284 aaPredicted RBP13.79□□□□□ -0.2
PFDN4-204ENST00000487129 CATSPEREQ5SY80 951 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 NIPAL1Q6NVV3 410 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 ADGRD1Q6QNK2 874 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 ABHD13Q7L211 337 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 NUDT8Q8WV74 236 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 ASB15Q8WXK1 588 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 RNASE6Q93091 150 aaKnown RBP13.79□□□□□ -0.2
PFDN4-204ENST00000487129 PYCR2Q96C36 320 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 KLHL31Q9H511 634 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 FBXO6Q9NRD1 293 aaPredicted RBP13.79□□□□□ -0.2
PFDN4-204ENST00000487129 ZFP69BQ9UJL9 534 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 ADAM21Q9UKJ8 722 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 ACAD8Q9UKU7 415 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 MMACHCQ9Y4U1 282 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 CAPN6Q9Y6Q1 641 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 EML6Q6ZMW3 1958 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 MPDZO75970 2070 aa13.79□□□□□ -0.2
PFDN4-204ENST00000487129 ARHGAP21Q5T5U3 1957 aa13.78□□□□□ -0.2
PFDN4-204ENST00000487129 ATP6AP2A0A1C7CYW4 349 aa13.78□□□□□ -0.2
PFDN4-204ENST00000487129 EIF3FO00303 357 aaPredicted RBP13.78□□□□□ -0.2
PFDN4-204ENST00000487129 WWP2O00308 870 aa13.78□□□□□ -0.2
PFDN4-204ENST00000487129 AVILO75366 819 aa13.78□□□□□ -0.2
PFDN4-204ENST00000487129 ATP6AP2O75787 350 aa13.78□□□□□ -0.2
PFDN4-204ENST00000487129 ZFAND5O76080 213 aa13.78□□□□□ -0.2
PFDN4-204ENST00000487129 CCL3P10147 92 aa13.78□□□□□ -0.2
PFDN4-204ENST00000487129 CCND1P24385 295 aa13.78□□□□□ -0.2
PFDN4-204ENST00000487129 MAN2A2P49641 1150 aa13.78□□□□□ -0.2
PFDN4-204ENST00000487129 HK2P52789 917 aa13.78□□□□□ -0.2
PFDN4-204ENST00000487129 BASP1P80723 227 aaKnown RBP13.78□□□□□ -0.2
PFDN4-204ENST00000487129 WLSQ5T9L3 541 aa13.78□□□□□ -0.2
PFDN4-204ENST00000487129 ZNF662Q6ZS27 426 aa13.78□□□□□ -0.2
PFDN4-204ENST00000487129 SLC13A5Q86YT5 568 aaPredicted RBP13.78□□□□□ -0.2
PFDN4-204ENST00000487129 ULK2Q8IYT8 1036 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms