RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 ISM1B1AKI9 464 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 TNFRSF10BO14763 440 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 LRRTM2O43300 516 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 AKAP8O43823 692 aaKnown RBP10.21□□□□□ -0.78
CCDC171-208ENST00000486641 HPGDSO60760 199 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 EPORP19235 508 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 OR1E1P30953 314 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 HMGCLP35914 325 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 ATN1P54259 1190 aaPredicted RBP10.21□□□□□ -0.78
CCDC171-208ENST00000486641 TBX4P57082 545 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 MLLT11Q13015 90 aaPredicted RBP10.21□□□□□ -0.78
CCDC171-208ENST00000486641 NCF4Q15080 339 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 PCBP1Q15365 356 aaKnown RBP eCLIP10.21□□□□□ -0.78
CCDC171-208ENST00000486641 GRK1Q15835 563 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 ZNF284Q2VY69 593 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 PAN2Q504Q3 1202 aaKnown RBP10.21□□□□□ -0.78
CCDC171-208ENST00000486641 KLHL22Q53GT1 634 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 GPR139Q6DWJ6 353 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 ARSKQ6UWY0 536 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 GET4Q7L5D6 327 aaPredicted RBP10.21□□□□□ -0.78
CCDC171-208ENST00000486641 WDR53Q7Z5U6 358 aaPredicted RBP10.21□□□□□ -0.78
CCDC171-208ENST00000486641 BCDIN3DQ7Z5W3 292 aaKnown RBP10.21□□□□□ -0.78
CCDC171-208ENST00000486641 NAGSQ8N159 534 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 FAM46DQ8NEK8 389 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 MYEOVQ96EZ4 313 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 B3GALT6Q96L58 329 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 SORCS2Q96PQ0 1159 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 FAM193BQ96PV7 902 aaPredicted RBP10.21□□□□□ -0.78
CCDC171-208ENST00000486641 MAPKAP1Q9BPZ7 522 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 TMEM43Q9BTV4 400 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 C2orf49Q9BVC5 232 aaPredicted RBP10.21□□□□□ -0.78
CCDC171-208ENST00000486641 DPCDQ9BVM2 203 aaPredicted RBP10.21□□□□□ -0.78
CCDC171-208ENST00000486641 SLC29A3Q9BZD2 475 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 SLC28A3Q9HAS3 691 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 ACER3Q9NUN7 267 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 DNAJC27Q9NZQ0 273 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 YARS2Q9Y2Z4 477 aaKnown RBP10.21□□□□□ -0.78
CCDC171-208ENST00000486641 PCDHB11Q9Y5F2 797 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 PATJQ8NI35 1801 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 PRR23AA6NEV1 266 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 CASTOR2A6NHX0 329 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 PCP4L1A6NKN8 68 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 TOR1AO14656 332 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 CHP2O43745 196 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 C1SP09871 688 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 SMPD1P17405 629 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 AMD1P17707 334 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 LHCGRP22888 699 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 PTX3P26022 381 aaPredicted RBP10.2□□□□□ -0.78
CCDC171-208ENST00000486641 FEN1P39748 380 aaKnown RBP10.2□□□□□ -0.78
CCDC171-208ENST00000486641 CASP9P55211 416 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 SRP54P61011 504 aaKnown RBP10.2□□□□□ -0.78
CCDC171-208ENST00000486641 CDC42EP1Q00587 391 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 IL18Q14116 193 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 FGFBP1Q14512 234 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 SF3A2Q15428 464 aaKnown RBP10.2□□□□□ -0.78
CCDC171-208ENST00000486641 RGNQ15493 299 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 NOXRED1Q6NXP6 359 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 ZNF730Q6ZMV8 503 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 GPAT4Q86UL3 456 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 FAM9CQ8IZT9 166 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 RNF175Q8N4F7 328 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 SYT14Q8NB59 555 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 AQP11Q8NBQ7 271 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 ZBTB44Q8NCP5 570 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.2□□□□□ -0.78
CCDC171-208ENST00000486641 LKAAEAR1Q8TD35 194 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 PIH1D2Q8WWB5 315 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 CMTM7Q96FZ5 175 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 KCNJ15Q99712 375 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 ACBD6Q9BR61 282 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 HTATIP2Q9BUP3 242 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 PDFQ9HBH1 243 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 C11orf16Q9NQ32 467 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 PLXNA4Q9HCM2 1894 aa10.2□□□□□ -0.78
CCDC171-208ENST00000486641 A0A0D9SEW6 157 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 A8MVJ9 347 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 PCDH7O60245 1069 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 STK16O75716 305 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 SERPINI2O75830 405 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 ZNF865P0CJ78 1059 aaPredicted RBP10.19□□□□□ -0.78
CCDC171-208ENST00000486641 ODC1P11926 461 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 COX7A2P14406 83 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 STK19P49842 368 aaPredicted RBP10.19□□□□□ -0.78
CCDC171-208ENST00000486641 CLCNKAP51800 687 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 CYP4F8P98187 520 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 EXOSC2Q13868 293 aaKnown RBP10.19□□□□□ -0.78
CCDC171-208ENST00000486641 ARHGEF7Q14155 803 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 LRRC32Q14392 662 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 GANABQ14697 944 aaKnown RBP10.19□□□□□ -0.78
CCDC171-208ENST00000486641 ZMYND11Q15326 602 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 STK11Q15831 433 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 IFI44LQ53G44 452 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 CLLU1Q5K131 121 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 PTRHD1Q6GMV3 140 aaKnown RBP10.19□□□□□ -0.78
CCDC171-208ENST00000486641 TMEM81Q6P7N7 255 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 USP30Q70CQ3 517 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 DNAJC5GQ8N7S2 189 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 PROKR2Q8NFJ6 384 aa10.19□□□□□ -0.78
CCDC171-208ENST00000486641 OR6C4Q8NGE1 309 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms