RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 RAP1GDS1P52306 607 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 SLC26A5P58743 744 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 SLC13A2Q13183 592 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 NAA30Q147X3 362 aaPredicted RBP12.1□□□□□ -0.47
CHMP3-208ENST00000486404 INAQ16352 499 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 MEP1AQ16819 746 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 TSNAXIP1Q2TAA8 658 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 FCRLBQ6BAA4 426 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 GRHL2Q6ISB3 625 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 CATSPER1Q8NEC5 780 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 SRFBP1Q8NEF9 429 aaKnown RBP12.1□□□□□ -0.47
CHMP3-208ENST00000486404 REPS1Q96D71 796 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 SMIM10Q96HG1 83 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 SERINC2Q96SA4 455 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 RHOXF2Q9BQY4 288 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 AICDAQ9GZX7 198 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 PRTFDC1Q9NRG1 225 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 TMCO1Q9UM00 188 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 TNPO3Q9Y5L0 923 aaKnown RBP12.1□□□□□ -0.47
CHMP3-208ENST00000486404 TRIM49D1C9J1S8 452 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 FAM227AF5H4B4 570 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 PRAMEF4O60810 478 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 SH3BGRLO75368 114 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 RBP1P09455 135 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 EPORP19235 508 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 BTG2P78543 158 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 GTF2H2Q13888 395 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 ADPRMQ3LIE5 342 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 TMEM35AQ53FP2 167 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 TECRLQ5HYJ1 363 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 ACER2Q5QJU3 275 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 LGSNQ5TDP6 509 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 PRAMEF9Q5VWM5 478 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 GTF2H2CQ6P1K8 395 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 ABHD17CQ6PCB6 329 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 CHSY3Q70JA7 882 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 TRMT10CQ7L0Y3 403 aaKnown RBP12.09□□□□□ -0.47
CHMP3-208ENST00000486404 VN1R5Q7Z5H4 357 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 CRLF3Q8IUI8 442 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 BEST3Q8N1M1 668 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 BCORP1Q8N888 145 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 PTGR2Q8N8N7 351 aaPredicted RBP12.09□□□□□ -0.47
CHMP3-208ENST00000486404 PRR7Q8TB68 274 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 GRHL3Q8TE85 626 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 F2RL3Q96RI0 385 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 UTP23Q9BRU9 249 aaKnown RBP12.09□□□□□ -0.47
CHMP3-208ENST00000486404 TBCDQ9BTW9 1192 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 MS4A8Q9BY19 250 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 OLAHQ9NV23 265 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 STMN3Q9NZ72 180 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 XPR1Q9UBH6 696 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 ADGRE2Q9UHX3 823 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 ZNF180Q9UJW8 692 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 ZNF490Q9ULM2 529 aaPredicted RBP12.09□□□□□ -0.47
CHMP3-208ENST00000486404 NTNG1Q9Y2I2 539 aa12.09□□□□□ -0.47
CHMP3-208ENST00000486404 HIVEP3Q5T1R4 2406 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 IGKV3D-11A0A0A0MRZ8 115 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 TCRBV16S1A1N1A0A5B0 115 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 SYNDIG1LA6NDD5 238 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 A8MUA0 341 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 PRAMEF2O60811 474 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 MYO1DO94832 1006 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 ABHD2P08910 425 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 MTHFD2P13995 350 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 CASP2P42575 452 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 MAGEA12P43365 314 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 LIM2P55344 173 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 HSD17B7P56937 341 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 OC90Q02509 493 aaPredicted RBP12.08□□□□□ -0.48
CHMP3-208ENST00000486404 AP5B1Q2VPB7 878 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 GOLGA7Q7Z5G4 137 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 CLNKQ7Z7G1 428 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 ZNF595Q8IYB9 648 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 LAS2Q8IYD9 372 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 OR7G3Q8NG95 312 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 ZNF473Q8WTR7 871 aaKnown RBP12.08□□□□□ -0.48
CHMP3-208ENST00000486404 DCAKDQ8WVC6 231 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 HAS2Q92819 552 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 ATP6V1E2Q96A05 226 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 ISL2Q96A47 359 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 CMTM7Q96FZ5 175 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 C5orf34Q96MH7 638 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 QRFPRQ96P65 431 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 NECTIN3Q9NQS3 549 aa12.08□□□□□ -0.48
CHMP3-208ENST00000486404 PNO1Q9NRX1 252 aaKnown RBP12.08□□□□□ -0.48
CHMP3-208ENST00000486404 USP9XQ93008 2570 aaPredicted RBP12.08□□□□□ -0.48
CHMP3-208ENST00000486404 ZGRF1Q86YA3 2104 aa12.07□□□□□ -0.48
CHMP3-208ENST00000486404 CLEC18AA5D8T8 446 aa12.07□□□□□ -0.48
CHMP3-208ENST00000486404 GABRR3A8MPY1 467 aa12.07□□□□□ -0.48
CHMP3-208ENST00000486404 SAP18O00422 153 aaKnown RBP12.07□□□□□ -0.48
CHMP3-208ENST00000486404 FCHO1O14526 889 aa12.07□□□□□ -0.48
CHMP3-208ENST00000486404 KLK8O60259 260 aa12.07□□□□□ -0.48
CHMP3-208ENST00000486404 UGDHO60701 494 aa12.07□□□□□ -0.48
CHMP3-208ENST00000486404 TGFB1P01137 390 aa12.07□□□□□ -0.48
CHMP3-208ENST00000486404 IFNA16P05015 189 aa12.07□□□□□ -0.48
CHMP3-208ENST00000486404 SNRPAP09012 282 aaKnown RBP12.07□□□□□ -0.48
CHMP3-208ENST00000486404 COL6A2P12110 1019 aa12.07□□□□□ -0.48
CHMP3-208ENST00000486404 EDN3P14138 238 aa12.07□□□□□ -0.48
CHMP3-208ENST00000486404 EEF1DP29692 281 aaKnown RBP12.07□□□□□ -0.48
CHMP3-208ENST00000486404 STX4Q12846 297 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms