RNA–Protein interactions for RNA: ENST00000486045.1

RHBDF1-209, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 2

Gene RHBDF1, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-209ENST00000486045 IL2P60568 153 aa17.07■□□□□ 0.32
RHBDF1-209ENST00000486045 SKP1P63208 163 aa17.07■□□□□ 0.32
RHBDF1-209ENST00000486045 HYAL2Q12891 473 aa17.07■□□□□ 0.32
RHBDF1-209ENST00000486045 PDAP1Q13442 181 aaKnown RBP17.07■□□□□ 0.32
RHBDF1-209ENST00000486045 CSHL1Q14406 222 aa17.07■□□□□ 0.32
RHBDF1-209ENST00000486045 STRA8Q7Z7C7 330 aa17.07■□□□□ 0.32
RHBDF1-209ENST00000486045 CNTN4Q8IWV2 1026 aa17.07■□□□□ 0.32
RHBDF1-209ENST00000486045 GPATCH11Q8N954 259 aa17.07■□□□□ 0.32
RHBDF1-209ENST00000486045 MYRIPQ8NFW9 859 aa17.07■□□□□ 0.32
RHBDF1-209ENST00000486045 AENQ8WTP8 325 aaKnown RBP17.07■□□□□ 0.32
RHBDF1-209ENST00000486045 TMEM125Q96AQ2 219 aa17.07■□□□□ 0.32
RHBDF1-209ENST00000486045 SPOCK3Q9BQ16 436 aa17.07■□□□□ 0.32
RHBDF1-209ENST00000486045 HIVEP1P15822 2718 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 CCDC168Q8NDH2 2452 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 A0A1B0GTH9 108 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 PABPN1LA6NDY0 278 aaKnown RBP17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 CTIFO43310 598 aaKnown RBP17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 ACSL3O95573 720 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 AP1S2P56377 157 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 REEP5Q00765 189 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 TLE4Q04727 773 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 HECTD2Q5U5R9 776 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 EMBQ6PCB8 327 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 MEX3BQ6ZN04 569 aaKnown RBP17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 KIAA0408Q6ZU52 694 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 CD163Q86VB7 1156 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 SULF2Q8IWU5 870 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 MARVELD2Q8N4S9 558 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 TBC1D19Q8N5T2 526 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 CA5BP1Q8WTZ4 195 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 CDKL2Q92772 493 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 C14orf79Q96F83 325 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 FUT8Q9BYC5 575 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 DEFB126Q9BYW3 111 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 SLC6A16Q9GZN6 736 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 AICDAQ9GZX7 198 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 ENKD1Q9H0I2 346 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 PRDM9Q9NQV7 894 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 SMYD2Q9NRG4 433 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 ZFATQ9P243 1243 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 HRH3Q9Y5N1 445 aa17.06■□□□□ 0.32
RHBDF1-209ENST00000486045 TRBV11-1A0A0K0K1C0 115 aa17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 FAM159BA6NKW6 160 aa17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 PSMD12O00232 456 aaPredicted RBP17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 TFECO14948 347 aaPredicted RBP17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 RIPK2O43353 540 aa17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 HS6ST1O60243 411 aa17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 CDC40O60508 579 aaKnown RBP eCLIP17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 C1QAP02745 245 aa17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 TPOP07202 933 aa17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 SMIM10L1P0DMW3 83 aa17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 RNH1P13489 461 aaKnown RBP17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 AHRP35869 848 aa17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 UBAP2Q5T6F2 1119 aaKnown RBP17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 NIPAL1Q6NVV3 410 aa17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 SBSNQ6UWP8 590 aa17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 GALNT7Q86SF2 657 aa17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 TMPRSS11BQ86T26 416 aa17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 CA13Q8N1Q1 262 aa17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 ACBD4Q8NC06 268 aa17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 APCDD1LQ8NCL9 501 aa17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 CHTF18Q8WVB6 975 aa17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 ATL1Q8WXF7 558 aa17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 CAVIN3Q969G5 261 aa17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 SMIM10Q96HG1 83 aa17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 TRIM54Q9BYV2 358 aa17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 NSMCE4AQ9NXX6 385 aa17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 KLF13Q9Y2Y9 288 aaPredicted RBP17.05■□□□□ 0.32
RHBDF1-209ENST00000486045 A0A087WUV0 522 aaPredicted RBP17.04■□□□□ 0.32
RHBDF1-209ENST00000486045 CXorf49A8MYA2 514 aaPredicted RBP17.04■□□□□ 0.32
RHBDF1-209ENST00000486045 CDK2AP1O14519 115 aa17.04■□□□□ 0.32
RHBDF1-209ENST00000486045 FCHO1O14526 889 aa17.04■□□□□ 0.32
RHBDF1-209ENST00000486045 PEX1O43933 1283 aa17.04■□□□□ 0.32
RHBDF1-209ENST00000486045 MYO1DO94832 1006 aa17.04■□□□□ 0.32
RHBDF1-209ENST00000486045 PTGS2P35354 604 aa17.04■□□□□ 0.32
RHBDF1-209ENST00000486045 NR0B1P51843 470 aaKnown RBP17.04■□□□□ 0.32
RHBDF1-209ENST00000486045 GPR85P60893 370 aa17.04■□□□□ 0.32
RHBDF1-209ENST00000486045 RBBP5Q15291 538 aaKnown RBP17.04■□□□□ 0.32
RHBDF1-209ENST00000486045 TESK1Q15569 626 aa17.04■□□□□ 0.32
RHBDF1-209ENST00000486045 KBTBD12Q3ZCT8 623 aa17.04■□□□□ 0.32
RHBDF1-209ENST00000486045 CMPK2Q5EBM0 449 aa17.04■□□□□ 0.32
RHBDF1-209ENST00000486045 TOR1AIP1Q5JTV8 583 aa17.04■□□□□ 0.32
RHBDF1-209ENST00000486045 NXPE4Q6UWF7 544 aa17.04■□□□□ 0.32
RHBDF1-209ENST00000486045 MDGA2Q7Z553 956 aa17.04■□□□□ 0.32
RHBDF1-209ENST00000486045 CDH24Q86UP0 819 aa17.04■□□□□ 0.32
RHBDF1-209ENST00000486045 THOC6Q86W42 341 aaKnown RBP17.04■□□□□ 0.32
RHBDF1-209ENST00000486045 ARMC10Q8N2F6 343 aa17.04■□□□□ 0.32
RHBDF1-209ENST00000486045 POGLUT1Q8NBL1 392 aa17.04■□□□□ 0.32
RHBDF1-209ENST00000486045 FAM57AQ8TBR7 257 aa17.04■□□□□ 0.32
RHBDF1-209ENST00000486045 PELI2Q9HAT8 420 aa17.04■□□□□ 0.32
RHBDF1-209ENST00000486045 ZNF223Q9UK11 482 aaPredicted RBP17.04■□□□□ 0.32
RHBDF1-209ENST00000486045 FBXW2Q9UKT8 454 aa17.04■□□□□ 0.32
RHBDF1-209ENST00000486045 DYRK1BQ9Y463 629 aa17.04■□□□□ 0.32
RHBDF1-209ENST00000486045 A0A0G2JN53 185 aa17.03■□□□□ 0.32
RHBDF1-209ENST00000486045 PIAS1O75925 651 aa17.03■□□□□ 0.32
RHBDF1-209ENST00000486045 ABHD2P08910 425 aa17.03■□□□□ 0.32
RHBDF1-209ENST00000486045 ENO2P09104 434 aaPredicted RBP17.03■□□□□ 0.32
RHBDF1-209ENST00000486045 PPP2R1BP30154 601 aa17.03■□□□□ 0.32
RHBDF1-209ENST00000486045 SLC29A2Q14542 456 aa17.03■□□□□ 0.32
RHBDF1-209ENST00000486045 PPP1R3AQ16821 1122 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms