RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 MYL2P10916 166 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 ICAM2P13598 275 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 IMPDH1P20839 514 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 ITGA3P26006 1051 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 CDH13P55290 713 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 CLCQ05315 142 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 RUNX2Q13950 521 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 RCN2Q14257 317 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 MYBPC3Q14896 1274 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 ABRAXAS2Q15018 415 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 ZRSR2Q15696 482 aaKnown RBP11.73□□□□□ -0.53
HMG20B-211ENST00000486028 NSDHLQ15738 373 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 AP5B1Q2VPB7 878 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 ZNF678Q5SXM1 525 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 C10orf62Q5T681 223 aaPredicted RBP11.73□□□□□ -0.53
HMG20B-211ENST00000486028 VWA5B1Q5TIE3 1220 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 KHDRBS2Q5VWX1 349 aaKnown RBP11.73□□□□□ -0.53
HMG20B-211ENST00000486028 TTC19Q6DKK2 380 aaPredicted RBP11.73□□□□□ -0.53
HMG20B-211ENST00000486028 ZYG11AQ6WRX3 759 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 CPEB2Q7Z5Q1 589 aaKnown RBP11.73□□□□□ -0.53
HMG20B-211ENST00000486028 KBTBD2Q8IY47 623 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 SHISA5Q8N114 240 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 CA13Q8N1Q1 262 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 OR52B6Q8NGF0 335 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 ADAMTS18Q8TE60 1221 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 RGMAQ96B86 450 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 CDK15Q96Q40 435 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 MTERF1Q99551 399 aaKnown RBP11.73□□□□□ -0.53
HMG20B-211ENST00000486028 MESP1Q9BRJ9 268 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 TMEM109Q9BVC6 243 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 RBCK1Q9BYM8 510 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 ZNF700Q9H0M5 742 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 ZNF160Q9HCG1 818 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 ZBTB26Q9HCK0 441 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 SEMA4BQ9NPR2 832 aaPredicted RBP11.73□□□□□ -0.53
HMG20B-211ENST00000486028 DMRT3Q9NQL9 472 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 PRDM7Q9NQW5 492 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 LANCL2Q9NS86 450 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 RIC8BQ9NVN3 520 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 LGALS13Q9UHV8 139 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 PLAAQ9Y263 795 aa11.73□□□□□ -0.53
HMG20B-211ENST00000486028 HEMK1Q9Y5R4 338 aaPredicted RBP11.73□□□□□ -0.53
HMG20B-211ENST00000486028 IGHV1-45A0A0A0MS14 117 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 OR2W5A6NFC9 320 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 FAM227AF5H4B4 570 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 K7EM74 188 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 MASP2O00187 686 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 PRMT3O60678 531 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 SH3BGRLO75368 114 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 ERLIN1O75477 346 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 MLYCDO95822 493 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 PROCP04070 461 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 COX6A1P12074 109 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 CPA3P15088 417 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 NR1D1P20393 614 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 ATP5A1P25705 553 aaKnown RBP11.72□□□□□ -0.53
HMG20B-211ENST00000486028 RAP1GDS1P52306 607 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 EFNA3P52797 238 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 RPS13P62277 151 aaKnown RBP11.72□□□□□ -0.53
HMG20B-211ENST00000486028 AP2B1P63010 937 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 RHAGQ02094 409 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 EEF1A2Q05639 463 aaKnown RBP11.72□□□□□ -0.53
HMG20B-211ENST00000486028 SLC18A2Q05940 514 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 ACTN3Q08043 901 aaPredicted RBP11.72□□□□□ -0.53
HMG20B-211ENST00000486028 IFT88Q13099 833 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 TRAF3Q13114 568 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 RAPSNQ13702 412 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 UNC50Q53HI1 259 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 FRG2Q64ET8 278 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 HDXQ7Z353 690 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 UBE3DQ7Z6J8 389 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 ANKRD37Q7Z713 158 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 PTRH1Q86Y79 214 aaKnown RBP11.72□□□□□ -0.53
HMG20B-211ENST00000486028 HPS6Q86YV9 775 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 C4orf33Q8N1A6 199 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 CCDC63Q8NA47 563 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 TEX19Q8NA77 164 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 ARMC2Q8NEN0 867 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 OR4F6Q8NGB9 312 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 WDR20Q8TBZ3 569 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 RDH11Q8TC12 318 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 TRPC4APQ8TEL6 797 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 L3HYPDHQ96EM0 354 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 PTCHD1Q96NR3 888 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 FRG2BQ96QU4 278 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 SMAD5Q99717 465 aaKnown RBP11.72□□□□□ -0.53
HMG20B-211ENST00000486028 TUBB6Q9BUF5 446 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 NUDT9Q9BW91 350 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 LHPPQ9H008 270 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 OR51B5Q9H339 312 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 LYRM4Q9HD34 91 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 C5AR2Q9P296 337 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 EMCNQ9ULC0 261 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 STK38LQ9Y2H1 464 aa11.72□□□□□ -0.53
HMG20B-211ENST00000486028 SMG1Q96Q15 3661 aaKnown RBP11.71□□□□□ -0.53
HMG20B-211ENST00000486028 G3V2L1 256 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 SAP18O00422 153 aaKnown RBP11.71□□□□□ -0.53
HMG20B-211ENST00000486028 CLDN4O14493 209 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 PLIN3O60664 434 aa11.71□□□□□ -0.53
HMG20B-211ENST00000486028 SERPINA7P05543 415 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms