RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 HPP00738 406 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 PDGFAP04085 211 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 SFTPCP11686 197 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 HIST1H1TP22492 207 aaPredicted RBP12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 JAK1P23458 1154 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 SSR2P43308 183 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 NAGLUP54802 743 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 LIM2P55344 173 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 RAB38P57729 211 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 DNAJB13P59910 316 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 PHEXP78562 749 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 Q0VFX4 171 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 LCP2Q13094 533 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 RAPSNQ13702 412 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 PCLAFQ15004 111 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 ABRAXAS2Q15018 415 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 TCHHL1Q5QJ38 904 aaPredicted RBP12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 TTC19Q6DKK2 380 aaPredicted RBP12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 LRIG3Q6UXM1 1119 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 FRMD7Q6ZUT3 714 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 GPRIN3Q6ZVF9 776 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 ANKRD37Q7Z713 158 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 GALNT16Q8N428 558 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 AMER2Q8N7J2 671 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 CDYL2Q8N8U2 506 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 ACOT4Q8N9L9 421 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 TMEM52Q8NDY8 209 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 SRFBP1Q8NEF9 429 aaKnown RBP12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 METTL21AQ8WXB1 218 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 FAM111AQ96PZ2 611 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 SMC6Q96SB8 1091 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 CSF3RQ99062 836 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 NUDT9Q9BW91 350 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 ZNF717Q9BY31 904 aaPredicted RBP12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 IQCGQ9H095 443 aaKnown RBP12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 ZNF160Q9HCG1 818 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 MLXIPLQ9NP71 852 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 ZNF71Q9NQZ8 489 aaPredicted RBP12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 FARSBQ9NSD9 589 aaKnown RBP12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 PSD3Q9NYI0 1048 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 PPT2Q9UMR5 302 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 DAPP1Q9UN19 280 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 TP53TG5Q9Y2B4 290 aa12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 PCDHGA9Q9Y5G4 932 aaKnown RBP12.78□□□□□ -0.36
SOX2-OT-209ENST00000485035 IGHV3-20A0A0C4DH32 117 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 PSMD12O00232 456 aaPredicted RBP12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 TYROBPO43914 113 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 PDYNP01213 254 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 MAOAP21397 527 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 PTX3P26022 381 aaPredicted RBP12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 RAP1GDS1P52306 607 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 HNRNPFP52597 415 aaKnown RBP12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 SOX8P57073 446 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 BTG2P78543 158 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 IFT88Q13099 833 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 AIMP2Q13155 320 aaKnown RBP12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 CUL3Q13618 768 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 NSDHLQ15738 373 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 LACTB2Q53H82 288 aaPredicted RBP12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 SGO1Q5FBB7 561 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 TNFAIP8L3Q5GJ75 292 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 LIPMQ5VYY2 423 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 OR4C11Q6IEV9 310 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 TCTN3Q6NUS6 607 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 QSOX2Q6ZRP7 698 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 NDUFAF7Q7L592 441 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 C10orf107Q8IVU9 208 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 FAM47BQ8NA70 645 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 PLPP5Q8NEB5 264 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 MYRIPQ8NFW9 859 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 TCP10LQ8TDR4 215 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 AGAP11Q8TF27 550 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 RGMAQ96B86 450 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 VPS50Q96JG6 964 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 MAGEB10Q96LZ2 347 aaPredicted RBP12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 MAPKAP1Q9BPZ7 522 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 CENPKQ9BS16 269 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 SLC25A23Q9BV35 468 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 ROGDIQ9GZN7 287 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 ZNF700Q9H0M5 742 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 ELOVL6Q9H5J4 265 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 ATP13A2Q9NQ11 1180 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 KCMF1Q9P0J7 381 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 SENP1Q9P0U3 644 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 MID2Q9UJV3 735 aa12.77□□□□□ -0.37
SOX2-OT-209ENST00000485035 IGKV3D-11A0A0A0MRZ8 115 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 NSG1A0A0A6YYJ2 146 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 TGFBR3LH3BV60 316 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 MANBAO00462 879 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 CYR61O00622 381 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 CTIFO43310 598 aaKnown RBP12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 PRMT3O60678 531 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 EEDO75530 441 aaKnown RBP12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 CELA2AP08217 269 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 ALDH3A1P30838 453 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 BSGP35613 385 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 TSFMP43897 325 aaKnown RBP12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 PKNOX1P55347 436 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 NFATC3Q12968 1075 aa12.76□□□□□ -0.37
SOX2-OT-209ENST00000485035 AP5B1Q2VPB7 878 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms