RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 PRDM7Q9NQW5 492 aa15.27■□□□□ 0.04
DDR1-246ENST00000485023 PTGFRNQ9P2B2 879 aa15.27■□□□□ 0.04
DDR1-246ENST00000485023 ANAPC2Q9UJX6 822 aa15.27■□□□□ 0.04
DDR1-246ENST00000485023 EMCNQ9ULC0 261 aa15.27■□□□□ 0.04
DDR1-246ENST00000485023 PCDHGA11Q9Y5H2 935 aa15.27■□□□□ 0.04
DDR1-246ENST00000485023 TLN1Q9Y490 2541 aaKnown RBP15.26■□□□□ 0.03
DDR1-246ENST00000485023 MAGEB17A8MXT2 336 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 H0YIV9 168 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 PRMT3O60678 531 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 UGDHO60701 494 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 SUPT7LO94864 414 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 GSTA1P08263 222 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 NUDT17P0C025 328 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 PRR35P0CG20 571 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 ITGAMP11215 1152 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 ATP5F1P24539 256 aaPredicted RBP15.26■□□□□ 0.03
DDR1-246ENST00000485023 SERPINB1P30740 379 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 HNRNPFP52597 415 aaKnown RBP15.26■□□□□ 0.03
DDR1-246ENST00000485023 LIM2P55344 173 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 SOX8P57073 446 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 RAB38P57729 211 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 OR4D2P58180 307 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 HERVK_113P63132 956 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 ACTN3Q08043 901 aaPredicted RBP15.26■□□□□ 0.03
DDR1-246ENST00000485023 BTBD16Q32M84 506 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 AGAP7PQ5VUJ5 663 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 TTC19Q6DKK2 380 aaPredicted RBP15.26■□□□□ 0.03
DDR1-246ENST00000485023 METTL2BQ6P1Q9 378 aaKnown RBP15.26■□□□□ 0.03
DDR1-246ENST00000485023 CHSY3Q70JA7 882 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 CLNKQ7Z7G1 428 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 L3MBTL4Q8NA19 623 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 CAVIN3Q969G5 261 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 REPS1Q96D71 796 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 AGAP4Q96P64 663 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 TUBB6Q9BUF5 446 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 ERVK-6Q9BXR3 956 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 NECTIN3Q9NQS3 549 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 DCDC2Q9UHG0 476 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 MED13Q9UHV7 2174 aa15.26■□□□□ 0.03
DDR1-246ENST00000485023 ZNF462Q96JM2 2506 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 A0A1W2PQ72 361 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 A8MUA0 341 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 COPEO14579 308 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 PCDH17O14917 1159 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 DPM1O60762 260 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 ETHE1O95571 254 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 SERPINA7P05543 415 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 CYC1P08574 325 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 KRT4P19013 534 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 ATP5A1P25705 553 aaKnown RBP15.25■□□□□ 0.03
DDR1-246ENST00000485023 PIK3CBP42338 1070 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 TLE1Q04724 770 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 CLCQ05315 142 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 SLC13A2Q13183 592 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 AP5B1Q2VPB7 878 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 TMEM35AQ53FP2 167 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 UNC50Q53HI1 259 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 ZNF678Q5SXM1 525 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 LETMD1Q6P1Q0 360 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 PAPD4Q6PIY7 484 aaKnown RBP15.25■□□□□ 0.03
DDR1-246ENST00000485023 QSOX2Q6ZRP7 698 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 SH2D5Q6ZV89 423 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 MILR1Q7Z6M3 343 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 RBMXL3Q8N7X1 1067 aaKnown RBP15.25■□□□□ 0.03
DDR1-246ENST00000485023 ACOT4Q8N9L9 421 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 CCDC63Q8NA47 563 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 PLPP5Q8NEB5 264 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 WDR20Q8TBZ3 569 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 MAPKAP1Q9BPZ7 522 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 WDR77Q9BQA1 342 aaPredicted RBP15.25■□□□□ 0.03
DDR1-246ENST00000485023 TBCDQ9BTW9 1192 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 NPLQ9BXD5 320 aaPredicted RBP15.25■□□□□ 0.03
DDR1-246ENST00000485023 CLK4Q9HAZ1 481 aaKnown RBP15.25■□□□□ 0.03
DDR1-246ENST00000485023 PRDM9Q9NQV7 894 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 PRTFDC1Q9NRG1 225 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 ADGRE2Q9UHX3 823 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 FBXW2Q9UKT8 454 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 DAPP1Q9UN19 280 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 PLAAQ9Y263 795 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 PCDHGB7Q9Y5F8 929 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 CSAG2Q9Y5P2 127 aa15.25■□□□□ 0.03
DDR1-246ENST00000485023 MYOCOSA0A1B0GUC4 107 aa15.24■□□□□ 0.03
DDR1-246ENST00000485023 PLPP1O14494 284 aa15.24■□□□□ 0.03
DDR1-246ENST00000485023 OR4F21O95013 312 aa15.24■□□□□ 0.03
DDR1-246ENST00000485023 OTCP00480 354 aa15.24■□□□□ 0.03
DDR1-246ENST00000485023 F10P00742 488 aa15.24■□□□□ 0.03
DDR1-246ENST00000485023 PROCP04070 461 aa15.24■□□□□ 0.03
DDR1-246ENST00000485023 MYL2P10916 166 aa15.24■□□□□ 0.03
DDR1-246ENST00000485023 HIST1H1TP22492 207 aaPredicted RBP15.24■□□□□ 0.03
DDR1-246ENST00000485023 CASRP41180 1078 aa15.24■□□□□ 0.03
DDR1-246ENST00000485023 MLLT10P55197 1068 aa15.24■□□□□ 0.03
DDR1-246ENST00000485023 RASA2Q15283 850 aa15.24■□□□□ 0.03
DDR1-246ENST00000485023 TCHHL1Q5QJ38 904 aaPredicted RBP15.24■□□□□ 0.03
DDR1-246ENST00000485023 DEPDC1Q5TB30 811 aa15.24■□□□□ 0.03
DDR1-246ENST00000485023 B3GNTL1Q67FW5 361 aaPredicted RBP15.24■□□□□ 0.03
DDR1-246ENST00000485023 SLC6A19Q695T7 634 aa15.24■□□□□ 0.03
DDR1-246ENST00000485023 EFCAB3Q8N7B9 438 aa15.24■□□□□ 0.03
DDR1-246ENST00000485023 CCNYL1Q8N7R7 359 aa15.24■□□□□ 0.03
DDR1-246ENST00000485023 SRFBP1Q8NEF9 429 aaKnown RBP15.24■□□□□ 0.03
DDR1-246ENST00000485023 RGMAQ96B86 450 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms