RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 TGFB1P01137 390 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 PDYNP01213 254 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 CTSBP07858 339 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 SLC35G6P0C7Q6 338 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 RPS2P15880 293 aaKnown RBP11.03□□□□□ -0.64
HPS4-212ENST00000481910 SERPINB1P30740 379 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 PIK3CBP42338 1070 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 POLE2P56282 527 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 TCTE1Q5JU00 501 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 SCIMPQ6UWF3 145 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 VN1R4Q7Z5H5 301 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 GPR135Q8IZ08 494 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 RNF175Q8N4F7 328 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 AFAP1L2Q8N4X5 818 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 CSNK1A1LQ8N752 337 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 CAMKVQ8NCB2 501 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 OR1L3Q8NH93 324 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 ZNF473Q8WTR7 871 aaKnown RBP11.03□□□□□ -0.64
HPS4-212ENST00000481910 SEC16BQ96JE7 1060 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 HBEGFQ99075 208 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 NLNQ9BYT8 704 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 SPRTNQ9H040 489 aaPredicted RBP11.03□□□□□ -0.64
HPS4-212ENST00000481910 CCDC134Q9H6E4 229 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 PFDN4Q9NQP4 134 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 SIDT1Q9NXL6 827 aaKnown RBP11.03□□□□□ -0.64
HPS4-212ENST00000481910 MARCOQ9UEW3 520 aaPredicted RBP11.03□□□□□ -0.64
HPS4-212ENST00000481910 HAO1Q9UJM8 370 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 RARRES3Q9UL19 164 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 TSC22D4Q9Y3Q8 395 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 SNX5Q9Y5X3 404 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 TXNDC9O14530 226 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 POLR1CO15160 346 aaPredicted RBP11.03□□□□□ -0.64
HPS4-212ENST00000481910 SH3BGRLO75368 114 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 CLEC3AO75596 197 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 JMJD7P0C870 316 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 ITIH1P19827 911 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 HTR6P50406 440 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 ITGA1P56199 1179 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 MC2RQ01718 297 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 EIF3IQ13347 325 aaKnown RBP11.03□□□□□ -0.64
HPS4-212ENST00000481910 PWP1Q13610 501 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 IL11RAQ14626 422 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 ABRAXAS2Q15018 415 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 HKDC1Q2TB90 917 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 TMEM95Q3KNT9 176 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 UGT3A2Q3SY77 523 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 LACTB2Q53H82 288 aaPredicted RBP11.03□□□□□ -0.64
HPS4-212ENST00000481910 C3orf38Q5JPI3 329 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 TMPRSS7Q7RTY8 843 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 VN1R5Q7Z5H4 357 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 PPP1R3BQ86XI6 285 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 MARCH9Q86YJ5 346 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 LSMEM1Q8N8F7 131 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 BMPERQ8N8U9 685 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 PIWIL2Q8TC59 973 aaKnown RBP11.03□□□□□ -0.64
HPS4-212ENST00000481910 CREB3L4Q8TEY5 395 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 TWIST2Q8WVJ9 160 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 TM4SF19Q96DZ7 209 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 ZNF570Q96NI8 536 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 PIF1Q9H611 641 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 FBXO8Q9NRD0 319 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 SLC39A1Q9NY26 324 aa11.03□□□□□ -0.64
HPS4-212ENST00000481910 B4E171 279 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 FOXE1O00358 373 aaPredicted RBP11.02□□□□□ -0.65
HPS4-212ENST00000481910 PLD2O14939 933 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 P2RX6O15547 441 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 HYAL3O43820 417 aaPredicted RBP11.02□□□□□ -0.65
HPS4-212ENST00000481910 TSPAN9O75954 239 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 SERPINA6P08185 405 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 ID4P47928 161 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 MAPK10P53779 464 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 RPS13P62277 151 aaKnown RBP11.02□□□□□ -0.65
HPS4-212ENST00000481910 OLR1P78380 273 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 ZNF33BQ06732 778 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 RGS1Q08116 209 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 MANEAQ5SRI9 462 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 PPP4R4Q6NUP7 873 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 CHSY3Q70JA7 882 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 SCUBE1Q8IWY4 988 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 DDIASQ8IXT1 998 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 KCT2Q8NC54 265 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 OR8K5Q8NH50 307 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 WDR36Q8NI36 951 aaKnown RBP11.02□□□□□ -0.65
HPS4-212ENST00000481910 USP7Q93009 1102 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 INTS12Q96CB8 462 aaKnown RBP11.02□□□□□ -0.65
HPS4-212ENST00000481910 CMTM7Q96FZ5 175 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 ZNF285Q96NJ3 590 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 CTRCQ99895 268 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 APMAPQ9HDC9 416 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 DMRT3Q9NQL9 472 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 EMC3Q9P0I2 261 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 PISDQ9UG56 409 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 RUVBL1Q9Y265 456 aaKnown RBP11.02□□□□□ -0.65
HPS4-212ENST00000481910 L3MBTL1Q9Y468 752 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 GPC6Q9Y625 555 aaPredicted RBP11.02□□□□□ -0.65
HPS4-212ENST00000481910 CFAP54Q96N23 3096 aa11.02□□□□□ -0.65
HPS4-212ENST00000481910 LRIT2A6NDA9 550 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 CDK2AP1O14519 115 aa11.01□□□□□ -0.65
HPS4-212ENST00000481910 EDF1O60869 148 aaKnown RBP11.01□□□□□ -0.65
HPS4-212ENST00000481910 GUCY1B2O75343 617 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms